Template-based Modeling Results for HYFC_ECOLI

Submitted Primary Sequence

>Length 315
MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL
533210201100000010000000000010011102111212401100110110020032231112211011100000000000000111111121021100000000000000000000000012001000000011002001110000000000000011010310020111001000000000000000000211301121131120003111111000000000001001000000000000011121332210000000000001000000000000110020000000100010000000000001112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL
1	SPARKS	2xwub	0.086	0.924	1.106	threading_1	SQDVLMKQIHKTSQCMWLMQALGFLLS-ALQVEEILKNLHS-----LISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTT---------LDISHPN----PVVVVLQQVFQLIQKVLSKWLNDAFAPMVPQLCEMLGRMYSTIASALDLTRQLVHIFA-HEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVD---SFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLALAPTVKASCGF-FTELLPRCGEVESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKFSLLSMWIKEALQ
2	PROSPECT2	3a6pA1	0.095	1.000	1.507	threading_2	LCEQLVKAVTVMMICVPCGLRLVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDTLSKQGETQTELVMFILLRLAEDVVIQQTLTQNMERIFSFLLNTLQENVNAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEGAAECLLIAVSRKGKLEDRKPLMVLFGTADGGGLVEKHYVFLKRLCQVLCALGNQLLLGADSDVETPSNFGKYLESFLAFTTFLRSSTQMTWGASRDPLLLIPKYLRASFNSSRAQQGEVMRLACRL
3	PPA-I	3zuxA	0.123	0.771	1.138	threading_3	HPKVVIIGVIAQFAIMPATAWCLSKLLLPAEIAVGVILVGCCPGG----TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLML--------AGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG---SKTEKLTDALPLVSVAAIVLIIGAVVGAS-KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLP-------------------YDAQKALTIEVGMQNSGLAAALAAAHF------AAAPVVAVPGALFSVWHNISGSLLATYWAAKA-------------------------------
4	SPARKS	2x19b	0.086	0.851	1.056	threading_4	LKAQLFTQITRFASGSKIVLTRLCVALASLAL-------SPDAWPCAVADVR-------------LFQAGQGRCLALLELLTVLPEEF---QTSRLTSLAVECGAVFPLLEQLLQ--------QPSSPSCVRQKVLKCFSSWVQLEVPLQEALIQAAFAALQDSIVNAISAQRYVNTLLKLIPLVLG--LQEQLRQAVQNGDETSHGICRIAVALGENH------SRALLD--QVEHWQSFLALVNIFCTGIPGHYPVNETTSSLTLTFWYTLQDDIL-----SFEAEKQAVYQQVY-RPVYFQLVDVLLHKAQF
5	PROSPECT2	3a0oA3	0.077	0.943	1.457	threading_5	GRSARHAAAWLNSEQLSAFADAVHCGWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLLAVAAWDTKGATSRAYNDEAGFRVVVALAWG-YDWLYDHLSEDERRTVRSVLLERTREVAVRSLSAVLTPACIALQGES-----------------DEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIPFFQNTGRFPLYTKAPGDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDY
6	PPA-I	3g61A1	0.057	0.892	1.060	threading_6	LYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNS---TNMSEADKRAMFAKLEEEM--TTYAYYYTGIGAGVLIVAYIQVSFW----------CLAAGRQIHKIRQKFFHAIMIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYE---------VFKIIDNKPSIDSFSGWLTLLLLAIVPIIAIAGVVEMKML----------SGQALKDKKELEGSGKIATEAIENFREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFT
7	SPARKS	2x1gf	0.080	0.914	1.012	threading_7	LKQKILESIVRFKIVLNRLCISLGAYIVHMLGEEVINTFQQRSADVQLWIMLEVLTAIPEEAQVIHTSVRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKN----IGYTIEGCVTITAVLLEVVHKCADENELAESCLKTMVNI--IIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNE-DIIVHIYMLFVSSVERHSADPELSILVHRIVQEILHCTD-----KPGIYPVEESCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSEQPD---------------
8	PROSPECT2	1ejlI	0.117	1.000	1.435	threading_8	NLESQLQATQAARKLLSSPIQFESAWALTNISEQTKAVVDGGASPHIAGDGSAFRDLVIKHGAIDLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLEVLADSCWAISYLTDGPNERIGVVPQLVKLLGALPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLKTNIQKEATWTMSNITAGRQDQIQQVVNLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKILNLIEKYFS
9	PPA-I	1pw4A2	0.089	0.610	1.001	threading_9	MQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLK----EVKHFALDKSSWAYFLYEYADKVFRGNRGATGVFFMTLVTIATIVYWM-----NPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLELVP------------------------------------------------------------------------------------------------------------------
10	PROSPECT2	1jdha	0.067	1.000	1.432	threading_10	SRHAIMRSPQMVSAIVRTMVLFYAITTLHNLLLHLQKMVALLNKTNLAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTRMEEIVEGCTGALHILARDVHNRIPLFVQLLYSPIENIQRVAAGVLCEL

Predicted Tertiary Structure


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TM-score=0.611 to 1xqrA SCOP code=a.118.1.21	TM-score=0.625 to 1u6gC SCOP code=a.118.1.2	TM-score=0.430 to 2r2vA SCOP code=h.1.3.1	TM-score=0.621 to 1u6gC SCOP code=a.118.1.2	TM-score=0.610 to 1j0nA SCOP code=a.102.3.2