Template-based Modeling Results for HYCG_ECOLI

Submitted Primary Sequence

>Length 255
MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR
CCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR
553212243232121222132001102220023042100001000100100100001001110003100010011132000000101003101210120121032110000000000210012211001110231020100012011101000100010011112323232223233331312223223213131131022110122123002201210230131013003334122021001101221222325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR
1	MUSTER	3iasF	0.331	0.569	1.817	threading_1	------------------EREGILFTTLEKLVAWGRSNSLWPAT-FGLACCAIEMMA---------------STDARQADVMIVAGRLSKKMAPVMRRVWEQMPDPKWVISMGACASSGGMF-NNYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQAYNERGERLPPVAA---------------------------------------------------------------------------
2	SPARKS	1h2rs	0.185	0.804	1.054	threading_2	------------------------LMG-------PRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSLDNSPHGFIAVVEGGIPTAANTMLDICSRILPKAQAVIAYGTCATFGGVQAPNPTGAKGVNDALKKAINIAGCPPNPYNLVGTIVYYLKN-------KAAPELDSLNRPTMFFGQT------VHEQCPRLPHFDAGEFAPS------FESEEARKGWCLYELGCKGPVTMNNCPKIKFNQTNW
3	PROSPECT2	1h2rs	0.147	0.855	1.628	threading_3	LMG-------------------------------PRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSAVNSPHGFIAVVEGGIPTAANGMLDICSRILPKAQAVIAYGTCATFGGVQAAKPNPTGGVNDALVKAINIAGCPPNPYNLVGTIVYYLKN------KAAPELDSLNRPTMFFGQTVHEQCPRLPHFDAGEFAPSFESEEARKLYELGCKGPVTMNNCPKIKFNQTNWPVDADFWDAMTPFYQN
4	HHPRED-l	3ayx_B	0.159	0.816	4.038	threading_4	-----------------------------------PRTPVIWLHGLECTCCSESFIRSAHPLAKVLSMSLDYDDTLKGNYILAVEGNPPLNQDPFSEQLKRMADDAKAIISWGSCASWGCVQAAKPNQATPVHKFLPI-IKVPGCPPIAEVMTGVITYMLT------FDRIPELDRQGRPKMFYSQRIHDKYRRPHFDAGQFVEARKGYCLY----KVGCKGPTSTVRWNGGTSFPQSGGCIGCSEDGFWDKGS-
5	SPARKS	2fug6	0.326	0.565	3.558	threading_5	------------------EREGILFTTLEKLVAWGRSNSLWPATF-GLACCAIEMMAS----------------TDAQADVMIVAGRLSKKMAPVMRRVWEQMPDPKWVISMGACASSGGMF-NNYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQAYNERGERLPPVAA---------------------------------------------------------------------------
6	HHPRED-g	3ayx_B	0.166	0.710	2.981	threading_6	----------------------------------PRTPVIW-LHGLECTCCSESFIRSAHPLAKVLSMSLDYDDTLMGNYILAVEGNPPLNQDPFSEQLKRMADDAKAIISWGSCASWGCVQAAKPNQATPVHKFLPI-IKVPGCPPIAEVMTGVITYMLTF--------------DRIPELDRQGRPKMFYQRIHDKCYRRPHFDAGQF-------------------VEEWDDEGARKGY-CLY----KVGCK
7	PROSPECT2	2fug6	0.287	0.561	1.929	threading_7	ERE------------------GILFTTLEKLVAWG------------------RSNSLWPATFGLACCAIEMASTDAQADVMIVAGRLSKKMAPVMRRVWEQMPDPKWVISMGACASSGGMF-NNYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQAYNERGERLPPVAA---------------------------------------------------------------------------
8	SP3	1h2rs	0.185	0.804	1.016	threading_8	------------------------LMG-------PRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSAAASPHGFIAVVEGGIPTAANTMLDICSRILPKAQAVIAYGTCATFGGVQAPNPTGAKGVNDALKKAINIAGCPPNPYNLVGTIVYYLKN-------KAAPELDSLNRPTMFFGQT------VHEQCPRLPHFDAGE-----FAPSFESEEARKGWCLYELKGPVMNNCPKIKFNQTNWP-VD
9	PPA-I	3iasF	0.331	0.569	2.788	threading_9	------------------EREGILFTTLEKLVAWGRSNSLWPATFG-LACCAIEMMA---------------STDARQADVMIVAGRLSKKMAPVMRRVWEQMPDPKWVISMGACASSGGMFN-NYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQAYNERGERLPPVAA---------------------------------------------------------------------------
10	PROSPECT2	1frfS	0.169	0.788	1.532	threading_10	----------------------------------KHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILTISLALEGKDGYYLVVEGGLPTIDGGMIETCKKAAAKAKGIICIGTCSPYGGVQKAKPNPSQGVSEALGVKINIPGCPPNPINFVGAVVHVL---------------TKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSF-----DSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVQG

Predicted Tertiary Structure


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TM-score=0.483 to 1qo0E SCOP code=c.23.1.3	TM-score=0.746 to 1ubmS SCOP code=e.19.1.1	TM-score=0.492 to 1qo0E SCOP code=c.23.1.3	TM-score=0.772 to 1ubmS SCOP code=e.19.1.1	TM-score=0.750 to 1frfS SCOP code=e.19.1.1