Template-based Modeling Results for HYCB_ECOLI

Submitted Primary Sequence

>Length 203
MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK
CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHCCCCCCCEEECCCEEEEECCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK
42110000121011020000000322433323100102012232110121011032010020010300022310000022101002000100112001012232232223232132221222224122223223122110110210123330000031011300100112101310332211201231131212332322328
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK
1	MUSTER	2vpzB	0.298	0.828	3.431	threading_1	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP-----------------------------------AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEPVAKALKAARVDVLRPEQGTRPLFYLNAPSESE
2	SPARKS	2vpwb	0.274	0.828	3.948	threading_2	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHPA-----------------------------------GYVSKCTFCAEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKDVLRPEQGTRPKLFPSKKGLTR
3	PROSPECT2	2vpwB	0.274	0.828	3.270	threading_3	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP-----------------------------------AGYVSKCTFCAHKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAALRPEQGTPSKKGLTRESEVH
4	PPA-I	2vpzB	0.268	0.828	4.640	threading_4	PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP-----------------------------------AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAALRPEQGTRPKLFYLNAPSKK
5	HHPRED-l	1kqf_B	0.256	0.828	4.604	threading_5	KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGWTVMRFSETEWLIRKDGCMHCEDPGCLKACPSAGAIYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKED----------------------------------NRVYKCTLCVDRGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGT-
6	HHPRED-g	2ivf_B	0.237	0.833	4.914	threading_6	RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEWNNVKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKENGIVLVDQERCKGHRHCVEACPYKAIYFNPVS----------------------------------QTSEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKKVALPLHAEYGTGPNIYYVPPMGAR
7	SP3	2vpwb	0.274	0.828	4.131	threading_7	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHP-----------------------------------AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKDVLRPEQGTRPKLFPSKKGLTR
8	SAM-T99	2vpzB	0.278	0.798	5.543	threading_8	-RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPA-----------------------------------GYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPEALKAAERVDVLRPEQGTRPKLFYLN-----
9	MUSTER	1ti4B1	0.196	0.828	3.194	threading_9	MQYYMVIDVAKCQDCNNCFMGCMDEHELNEWHRWMNIERRERGINYRPTPCMHCENAPCV-AKGNGAVYQEDGIVLIDPEKAKGKKELLDTCPYGVMYWNEE----------------------------------ENVAQKCTMCAHLPKMPRCAHNCGSFVYEFLKPEAMAKKVEEEGLEVIKPELGTKPVYYKNLYRFEK
10	SPARKS	1ti2b	0.165	0.867	3.657	threading_10	EQYYMVIDVAKCQDCNNCFMGCMDEHELNRGHRWMNIERRERGINYRPTPCMHCENAPCVAKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEE-----NVAQKCTMCAHLLDDESWA----------------------PKMPRCAHNCGSFVYEFLKPEAMAKKVEEEGLEVIKPELGTKPVYYKNLYRFEK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.754 to 1ti4B SCOP code=b.3.5.1	TM-score=0.747 to 1ti4B SCOP code=b.3.5.1	TM-score=0.740 to 1ti4B SCOP code=b.3.5.1	TM-score=0.678 to 1ti4B SCOP code=b.3.5.1	TM-score=0.754 to 1ti4B SCOP code=b.3.5.1