Template-based Modeling Results for CYBH_ECOLI

Submitted Primary Sequence

>Length 235
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
5544332221110010001000000000000000000000211111112110000001010000000000000000000000014222110100211232002000100100000233122310100000000000000000000000001122131111000100020011112201100000300000000000000000002112233210000011020232232244347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
1	MUSTER	1kqfC	0.187	0.843	1.251	threading_1	--SKSK---MIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQT--FGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKK--IPWLLNIVEVLKGNEHKVADVGYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQ-------------YFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVSRREKAEAKKESE
2	SPARKS	1kqfc	0.171	0.847	1.011	threading_2	-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGT--PQMGRILHPFFGIAIFVALMFMFVRF------VHHN----IPDKKDIPWLLN-IVEVLKGNEHKVADVGKNAGQKMMFWSIMSMIFVLLVTGVIIWRPYF-------------AQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRWREIEKAEAK
3	PROSPECT2	3a0oA3	0.044	0.970	1.337	threading_3	WLNSEQ-------LSAFADAVAKHCGWAEFYEKSVEPWLERPVMPEPQPYPRQMYIDCQEVIYAIRHLAIAGRVSRKWLLAVAAWDTKGADWLYDHLSEDERRTVRSVLLERTVIAHARIHVFPYDSHAVRSLSAVLTPACIWLDYTVEFLATLYSPWMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLGYNVRQFAGVTIKADATGTEMAFYNYGWWHDYPQVEAVSADLP
4	PPA-I	1kqfC	0.147	0.809	1.583	threading_4	-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGT--PQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYF-------------PMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVS----------RR
5	HHPRED-l	1kqf_C	0.131	0.847	7.470	threading_5	-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTF--GTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDK----------KDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQY-------------FPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRWHHPRWYRE-
6	HHPRED-g	1kqf_C	0.146	0.847	7.811	threading_6	-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQ--TFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKK----------DIPWL-LNIVEVLKNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFA----Q---------YFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRKHHPRWYREI
7	SP3	1kqfc	0.191	0.847	1.895	threading_7	--SKSKMIVR---TKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQ--TFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKKDIPWLLN-IVEVLKGNEHKVADVGYNAGQKMMFWSIMSMIFVLLVTGVIIW----RPYFAQYFP-----MQVV----RYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVWAKKREIEKAEAK
8	SAM-T99	1kqfC	0.151	0.847	3.335	threading_8	-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMG--RILHPFFGIAIFVALMFMFVRFVH--------HNIPDKKDIPWLNIVEVLKG---NEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYF------AQYFPMQVVRYSL-------LIHAAAGIILIHAILIHMYMAFWVK-----GSIKGMIEGKVSRRWAKKHHPRWY
9	MUSTER	2vpyC	0.141	0.872	0.676	threading_9	LPNAQE-------------FWHWTNALHFVLVGLAGGVAL---------AALLHLKGDAEARRYTLYALMLIALDLFILWAESPARFRLFLSFHPTSPGAWGLGLGFLTGGLLYLGKGSQ--------RALAWALLVFSLVALSYPGLALAVNLNRPLWNGLMAGLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLYPLTLPPEARGHLLAGFLLLGLGTFWQERLA
10	SPARKS	1pb6a	0.054	0.715	0.726	threading_10	AELAGVSKTNLL--------YYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPI----DPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR-------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.833 to 1kqfC SCOP code=f.21.1.1	TM-score=0.839 to 1kqfC SCOP code=f.21.1.1	TM-score=0.813 to 1kqfC SCOP code=f.21.1.1	TM-score=0.548 to 1j0nA SCOP code=a.102.3.2	TM-score=0.825 to 1kqfC SCOP code=f.21.1.1