Template-based Modeling Results for HSLO_ECOLI

Submitted Primary Sequence

>Length 292
MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH
CCCCCEEEEEEECCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH
5543010010003212010000102300220042130130012000000000000011032311010002031211000010133220100010213123322021102210000010233222110001022220110022002313312000001013232210000000210123323331021012013203233112220220012013333010123330313020113100300420133102200243230100010012202021210120233223233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH
1	MUSTER	1vq0A	0.234	0.966	3.526	threading_1	--HHHMIYYGTMFDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVAPKVELPLNFDVAGAIGQGVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLDSDGVKIAGGFAVQIIDRTLE-QEKVEMIEKNIKNLPSISKLEAEPLDVLERIFG-EKVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMRKE-GKGEVVCKWCNTRYVFSEEELEELLKFKVDD-----
2	SPARKS	1vzya	0.249	0.962	7.134	threading_2	---MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSPQVHFDLNADVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVNPDNTILAAGGFIIQLMPGTDDTITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEK-PEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT-------
3	PROSPECT2	1vzyA	0.240	0.955	5.447	threading_3	M---DYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSFDLNAAGKLDVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVNPDNTILAAGGFIIQLMPGTD--DETITKIEQRLSQVEPISKLGLTPEEILEEVLGE-KPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT-------
4	PPA-I	1vzyA	0.233	0.955	6.653	threading_4	---MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSFDLNAAGKLDVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLPDNTILAAGGFIIQLMPGTD--DETITKIEQRLSQVEPLIQKGLTPEEILEEVLGEK-PEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT-------
5	HHPRED-l	1i7f_A	0.996	0.764	7.811	threading_5	---HDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGP-NLAVINGNNNQQ-RGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAADLEDYF-RSEQLPTRLFIRTGDVDGKPAAGG-LLQV-PAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCT-------------------------------------------------------------
6	HHPRED-g	1i7f_A	0.996	0.764	6.483	threading_6	---HDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGP-NLAVINGNNNQQ-RGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAADLEDYF-RSEQLPTRLFIRTGDVDGKPAAGG-LLQV-PAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCT-------------------------------------------------------------
7	SP3	1vzya	0.254	0.955	7.156	threading_7	M---DYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSPQVHFDLNADVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVNPDNTILAAGGFIIQLMPGTD--DETITKIEQRVEPISKLIQKGLTPEEILEEVLGEK-PEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT-------
8	SAM-T99	1vzyA	0.240	0.955	8.064	threading_8	---MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFGKLDVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDILAAGGFIIQLMPGTDDEITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGE-KPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQ---------
9	MUSTER	1vzyA	0.251	0.955	3.525	threading_9	M---DYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSPQVHFDLNLDVRRAVGNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLPDNTILAAGGFIIQLMPGTD--DETITKIEQRLEPISKLIQKGLTPEEILEEVLGEK-PEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTT-------
10	SPARKS	1vq0a	0.234	0.966	6.936	threading_10	--HHHMIYYGTMFDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVNPKVELPLNEDVAGAIGQGVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLDSDGVKIAGGFAVQIIDRT-LEQEKVEMIEKNIKNLPSISKLEAEPLDVLERIFGE-KVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMRKE-GKGEVVCKWCNTRYVFSEEELEELLKFKVDD-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.952 to 1vq0A TM-score=0.677 to native SCOP code=d.193.1.1	TM-score=0.959 to 1vzyA TM-score=0.667 to native SCOP code=d.193.1.1	TM-score=0.958 to 1vzyA TM-score=0.664 to native SCOP code=d.193.1.1	TM-score=0.942 to 1vzyA TM-score=0.663 to native SCOP code=d.193.1.1	TM-score=0.942 to 1vzyA TM-score=0.668 to native SCOP code=d.193.1.1

Experimental Structure

Download 1hw7A

SCOP code=d.193.1.1