Template-based Modeling Results for T1MK_ECOLI


  Submitted Primary Sequence

>Length 529
MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCEECEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE
4423201210120001023221213100100000000200320031132023202121012312231121023002300431331032002101221231310110021022021231232322100020010002200332532211100021002000210313332201100001100012002103231322331213111111221000011110001000000001203031321010311111222233123010000102112222232242213322221000010002103320100000021011321311100220033020100010021112121020000001222223333333223100000022323322442302330031003001313322234232321220312101312222213220222324412331032233321312103323221132033122102200120230031011003402223223102300221122244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE
1MUSTER2ar0A0.9540.8963.068threading_1---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKCKET-GQEAEYLPEGYRWDDLKSRIGQEQLQFYRK-LVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSN----------------------------------SLDWQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL-NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSN-KQLCFQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL-DKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNP-SFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDPE--------PDVLAAEAGELVQALSELDAL--ELGASDEADLQRQLLEEAFGGV--
2SPARKS2ar0a0.9260.9006.953threading_2---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKCKETGQEA-EYLPEGYRWDDLKSRIGQEQLQFYR-KLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSN---------------------------------DSLDWQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA-LNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF-QHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRD-LDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNPS-FGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKD-PEPDVLAAEAGELVQALSELDA--------LRELGASDEADLQRQLLEEAFGGV--
3PROSPECT22y7cB1.0001.0006.419threading_3MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE
4PPA-I2ar0A0.9410.9004.829threading_4---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKCKET-GQEAEYLPEGYRWDDLKSRIGQEQLQFYRKLVH-LGEDDKKLVQAVFHNVSTTITEPKQITALVSND---------------------------------SLDWQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL-NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSN-KQLCFQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL-DKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNPS-FGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDPE--------PDVLAAEAGELVQALSELDALR-ELGASDEADLQRQLLEEAFGGV--
5HHPRED-l2ar0_A1.0000.9006.896threading_5---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLK-CKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRK-LVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSN-DSLDW--------------------------------QYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL-NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF-QHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL-DKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTN-PSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKD-------PEPDVLAAEA-GELVQALSELDAL-RELGASDEADLQRQLLEEAFGGV--
6HHPRED-g2ar0_A1.0000.9006.133threading_6---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLK-CKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRK-LVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSN-DSLDW--------------------------------QYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL-NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF-QHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL-DKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTN-PSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKD-------PEPDVLAAEA-GELVQALSELDAL-RELGASDEADLQRQLLEEAFGGV--
7SP32ar0a0.9560.9006.579threading_7---NDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKCKETGQEA-EYLPEGYRWDDLKSRIGQEQLQFYR-KLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVS---------------------------------NDSLDWQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA-LNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF-QHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLDK-CHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNP-SFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDK-------DPEPDVLAAE-AGELVQALSELDA-LRELGASDEADLQRQLLEEAFGGV--
8SAM-T993khkA0.2230.7966.462threading_8-FLNDLDNQLWRAADKLR-SNLDAANYKHVVLGLIFLKYVSDAFEERFWVPKTARWNKLRDVILPTSVSWLIDNAFDDIEKANPKLKGILNRISQYQLDADKLIGLINE------------FSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKK---QISVYGQESNPTTWKLAAMNMVIRGIDF----NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKN-AKNGKRDRRGQVLFIDARKLGYMKDVLRDFKDEDIQKLADTFHNW-----QQEWS--------------------EENNQAGFCFSADLALIRKND-FVLTPGRYVG-----------------------------------------------------------
9MUSTER2okcB0.3570.7732.587threading_9-TEQSLTKKVWNLATTLAGQGIGFTDYITQLTYLLFLKDAENVFGEESAIPTGYQWADLIAFDGLDLVKQYEETLKLLSELD-NLIGTIYTKAQNKIDKPVYLKKVITIDEEQWL------IDGDVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAV-DCINPQ-GETVCDPACGTGGFLLTAYDYKGQSAS------KEKRDFLRDKALHGVDNTPLVVTLAS-NLYLHGIGTDRSP---IVCEDSLEKEPST--LVDVILANPPFGTRPAGSNRPDFYVETKNNQLNFLQHL---LKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQP---------TKEIWFYDYRTDIKHTLATNKLERHHLDDFVSCYNNRVEIYDANNPQGRWRKYPVDEIIARDKSLDI-TWIKP-------------------------------------------------------------------------------------
10SPARKS3khka0.2260.7946.574threading_10QFLNDLDNQLWRAADKLR-SNLDAANYKHVVLGLIFLKYVSDAFEERQQEPKTARWNKLRDVITLSVSWLIDNAFDDIEKANPKL-KGILNRISQYQLDADKLIGLINEF------------SKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKH---ANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFG----KKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKNAK-NGKRDRRGQVLFIDARKLGYMDRVLRDFKDEDIQKLADTFHNWQQEWEENNQAGFCFSADLALIRKNDFVLTPGRYVG--------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.803 to 2ar0A
TM-score=0.843 to native
SCOP code=c.66.1.45		 TM-score=0.802 to 2ar0A
TM-score=0.841 to native
SCOP code=c.66.1.45		 TM-score=0.786 to 2ar0A
TM-score=0.825 to native
SCOP code=c.66.1.45		 TM-score=0.833 to 2okcB
TM-score=0.673 to native
SCOP code=c.66.1.45		 TM-score=0.784 to 2ar0A
TM-score=0.822 to native
SCOP code=c.66.1.45

  Experimental Structure

Download 2ar0A
SCOP code=c.66.1.45