Template-based Modeling Results for HOFQ_ECOLI

Submitted Primary Sequence

>Length 412
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
CHHHHHHHHHHHHCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
4220000000000101312333201000120201200200032151100003402020102022121320020004011011112120001122222122113221221323222312010010210202200400241032301010132111000111320021023002311222210101010010223212200010001213211021211111121111111120000002011210200010035342110002020001341201022222000102224322110201301000100020155120102010122322322332323111022110101020321100000000122222122201100200100200323233322210000010201347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
1	PROSPECT2	1wkyA	0.134	0.886	1.469	threading_1	GHAWYKDQATTAIEGIANTGANTVRIVLTKDDIQTVRNLISLAEDNNLV--------AVLEVHDATLNRAVDYWIEMEDTVIINIANEWFGSWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNA------DPQRNTMFSIGNASQVRTNIDRVLNQDLA---LVIGHRHTNGDVDESEQRGVGWLAWSWKGNGPEWEYLDLSNDWAGNNLTAW---------GNTIVNGPYGLRETSKLSTVFTPTTLYDFEESTGSSLSRGPWTVTEWSSKGNHSLKADIQQHYLHVIQNRSLQQNSRIQATVKHAGM-----------------TARLYVKTGHGYTWYSGSFVPTTLSLDLSNVQNLSQVREIGVQFQSESNSSGQTS--IYIDNVIVE--
2	MUSTER	3ezjG	0.130	0.466	0.879	threading_2	---------------------ATFTANFKDTDLKSFIETVGANLNKTIIM---VQGAVSIRTMTLNYYQLFLNLLEAQGYAVVPMNDVLKVVK------------------SAGDEMVTKVVPVRNVSVRELAPILRQMIAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNR---TEEVIPLDNASASEI------------------ARVLESLTQIVADERTNSVIVSGDPATRDKMRRLIRRLD-------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	3ossd	0.126	0.367	2.391	threading_3	---------------------ATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTTPLNYYQLFLNLLEAQGYAVVPMYIDTNNDGY-----IEGDELVLKVVKSAGDEMVTKVVPVRNVSVRELAPILRQMIAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	3gr5A	0.167	0.364	1.820	threading_4	MSSLEKRL-----------GKNEYFIITKSSPVRAILNDFAANYSIPVFISSSVNDDFSGEIKNEKPVKVLEKLSKLYHLTWYYDENILYIYKTNE--------------------ISRSIITPTYLDIDSLLKYLSDTISNSCNVRKITTFNSIEVRGVPECIKYITSLSESLDKEAQS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
5	PPA-I	2y3mA	0.290	0.318	1.853	threading_5	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIIDTV-----SLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTK---------------------AQLNTATIKLHFAKASEVMKSLTSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-l	2y3m_A	0.305	0.318	4.761	threading_6	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIID-----TVSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTK---------------------AQLNTATIKLHFAKASEVMKSLTSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	2y3m_A	0.305	0.318	4.887	threading_7	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIID-----TVSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTK---------------------AQLNTATIKLHFAKASEVMKSLTSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SP3	2y3ma	0.298	0.318	2.298	threading_8	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIIDT-----VSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTK---------------------AQLNTATIKLHFAKASEVMKSLTSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SAM-T99	2y3mA	0.305	0.318	2.733	threading_9	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIID-----TVSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFTKAQ---------------------LNTATIKLHFAKASEVMKSLGSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	MUSTER	2y3mA	0.298	0.318	0.772	threading_10	-------------------QNPVFSIRLKQAPLVPTLQQLALAHNTNLIIDT-----VSLQLENVDLDQLFRSVAKIKQLDLWQENGIYYFT---------------------KAQLNTATIKLHFAKASEVMKSLTSLLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.366 to 1p6tA SCOP code=d.58.17.1	TM-score=0.645 to 1wkyA SCOP code=b.18.1.31	TM-score=0.399 to 3d37A SCOP code=b.106.1.1	TM-score=0.388 to 1tuaA SCOP code=d.51.1.1	TM-score=0.418 to 2p5zX SCOP code=b.40.8.1