Submitted Primary Sequence |
>Length 259 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250 |
Predicted Secondary Structure |
>C-coil;H-helix;E-sheet MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY CCCCCCEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250 |
Predicted Solvent Accessibility |
>0-buried to 9-exposed MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY 5433111100002321000000132253000110010103420123131220320030012005403320100000122210011011132212331111101010231020213201000021132210000001131021002003405020100102000001002102332000001122100001312102311111210320011011323201100301000110012210201311010000000011424 1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789 --------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250 |
Top 10 Templates |
Rank | Method | Template | Identity | Coverage | N-Zscore | Threading Alignment | MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY |
1 | MUSTER | 2ychA | 0.185 | 0.958 | 1.383 | threading_1 | --PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAESLVLLRGDTYGRIYDAIRPVLVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFESIGPEFAVALGLALRGVE |
2 | SPARKS | 2ycha | 0.185 | 0.958 | 3.233 | threading_2 | --PRVEALGLEIGASALKLVEV--SGNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLEGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEKPLAVRVLTLSRSFNLDLLALVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFEEIGPEFAVALGLALRGVE |
3 | PROSPECT2 | 2ychA | 0.165 | 0.958 | 2.104 | threading_3 | PRVEA--LGLEIGASALKLVEVS--GNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARTRKYVVTALSNLAVILRPIQVPKPLKEEEA----VRWEAERYIPFPIE-VVLDFAPQEGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEESLVLLRGDKPLAVRLDLLAAEEVKRTYGRIYDAIRPVQLSPEVGYLLGGGSVNPWEAVAVDPKRFESEQLQFAVALGLALRVEP |
4 | PPA-I | 2ychA1 | 0.122 | 0.568 | 2.955 | threading_4 | --PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPKPLKE----EEAVRWEAERYIPFPIE-VVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPVVLD----------------------------------------------------------------------------------------------------- |
5 | HHPRED-l | 2ych_A | 0.192 | 0.927 | 7.298 | threading_5 | --PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLL-EG-VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPK---PLKE-EEAVRWEAERYIPFPI-EVVLDFAPLTPLVQV-VAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEKPLAVRVLTLSGKYG----RIYDARRSL--SPEVGYLLGGGSKLRWEAVAVDPKQLQEIGPEFAVALGLALRGV- |
6 | HHPRED-g | 2ych_A | 0.192 | 0.946 | 6.814 | threading_6 | --PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLL-EG-VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPK---PLKE-EEAVRWEAERYIPFPI-EVVLDFAPLTPLVQV-VAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGARRSL--SPEVGYLLGGGSVNPWEAVAVDPEQLQEIGPEFAVALGLALRGVE |
7 | SP3 | 2ycha | 0.181 | 0.958 | 2.982 | threading_7 | --PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTPEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEGKDFTEAIARSFNLDLLAAELVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFEEIGPEFAVALGLALRGVE |
8 | SAM-T99 | 2ychA | 0.192 | 0.927 | 2.920 | threading_8 | --PRVEALGLEIGASALKLVEV--SGNPPALKALASRPTPPGLLEGVA--EPAALAQEIKELLLEARTRKRVVTALSNLAVILRPIQVPK-PLKEEEAVRW---EAERYIPFPI-EVVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPLDVKPFAGLYPLEA--------RLAEEPDRVFLVLDIGAESTSLVLLRGDKPLALRGLASLLTDTLGVNLEPVNPWEAVAVDPKQLQEIGPEFAVALGLALRGVE |
9 | MUSTER | 2ychA1 | 0.122 | 0.568 | 1.277 | threading_9 | --PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLD----------------------------------------------------------------------------------------------------- |
10 | SPARKS | 1e4ft | 0.091 | 0.981 | 1.918 | threading_10 | ---TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVK--SRGLDEGEIKDAIAFKESVNTLLKELSLRSDFVISFSSVSFEREDTVIEKRSITLDILSEMQSEALEKLKENGLHIFSKRYLLDDERIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVTPEKDRGVVVVNLGYNIKISYVPVDVSAVLDTSFEESERLIITHDLKEEEIQYRGLDGMSKSKKFFREVEAKIGIPGGVVLTGGGAKIPRI |
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