Template-based Modeling Results for GSPH_ECOLI

Submitted Primary Sequence

>Length 169
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
5543311211100000010000000022112334222230221023011002101220112212000001322010000022232231121333123213331332111233324344232010000032310101000122223320000001211203212243345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
1	MUSTER	2knqA	0.979	0.840	3.253	threading_1	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
2	SPARKS	2knqa	0.979	0.840	4.017	threading_2	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
3	PROSPECT2	2knqA	0.986	0.840	2.830	threading_3	MA---------------------------YGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
4	PPA-I	2knqA	0.979	0.840	6.947	threading_4	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
5	HHPRED-l	2knq_A	0.957	0.828	7.065	threading_5	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAA-DESNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTR-
6	HHPRED-g	2knq_A	0.899	0.817	6.462	threading_6	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAANDWDEELSIHLQ----PFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
7	SP3	2knqa	0.979	0.840	3.013	threading_7	---------------------------MAYGREDVANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
8	SAM-T99	2knqA	0.958	0.840	3.613	threading_8	MAYGR-------------------------ED--VANTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP
9	MUSTER	2qv8A	0.231	0.769	2.262	threading_9	-------------------------------------DEAKISAQSFYQRLLLLNEEAILSGQDFGVRIDVDTRRLTFLQLTADK-GWQKWQNDKTNTLKEGLQLDFELGGGAWQKDDRPAPQLFVLSSGEVTPFTLSIFPKGQEDEQWRVTAQENGTLRL-LAPGESD
10	SPARKS	2qv8a	0.242	0.757	2.745	threading_10	-------------------------------------DEAKISAQSFYQRLLLLNEEAILSGQDFGVRIDVDTRRLTFLQLTADK-GWQKWQNDKTNTLKEGLQLDFELGGGAWQKDDEPAPQLFVLSSGEVTPFTLSIFPKGDEQWRVTAQENGTLRLLAPGESD---

Predicted Tertiary Structure


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TM-score=0.480 to 1oqwA SCOP code=d.24.1.1	TM-score=0.480 to 1oqwA SCOP code=d.24.1.1	TM-score=0.480 to 1oqwA SCOP code=d.24.1.1	TM-score=0.474 to 2r2vA SCOP code=h.1.3.1	TM-score=0.480 to 1oqwA SCOP code=d.24.1.1