Template-based Modeling Results for LEP4_ECOLI


  Submitted Primary Sequence

>Length 225
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
441010000000000200010000101323231201132001104342010020010000000000011010110000000000000000000103131022200000000000000110212011000000000000000000000003230112000100000000000110000000000000000000111333222200100000000000000210022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
1PROSPECT23a0oA30.0761.0001.279threading_1GLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHHAVRSLSAVLTPACIALQGESDEAGEWLDYTVGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQ
2HHPRED-l3s0x_A0.1620.6042.266threading_2--------------------------------------------------------------------------SGS-EYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFIGIFF-VFLPFVILFRNGAPKPQIPLIIPITLSYLVTPIIGDRIL-
3HHPRED-g3s0x_A0.1670.6134.755threading_3------------------------------------------------------------------------SGS--IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFINGIF-VFLPFVILFNGAKNETQIPLIIPITLSYLVTPIIGDRILD
4PROSPECT21ezfa0.0680.9731.253threading_4NSLMRNAVCIFYLVLRALDTLE--DDMTISHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFR----NLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRQEVWSRYVKKLGDFAIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNKGAVKIDATNMPAVKAIIYQYMEEIYHN
5PROSPECT21hzfa0.0920.9641.240threading_5IYLAPTLAASRYLDKTDLIQKGYMRIQQFRKA-----DGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQPVLDRSQGGLVGN--DETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKASA-GLLGAHAAAITAYALTLTKAPADLRGVAHLWIETTAYALLHLLLHEGKAEADQASAWLVIALDALSAYWIASHT
6PROSPECT22fozA0.1161.0001.239threading_6MASLRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMELEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELVPTAIYCFLRCMEPDPEIPSAFNSLQTIATMAGAIAGAYYGM
7PROSPECT23g9dA0.0870.9691.215threading_7SIRSRALGAYLGLACGDALGATVEFLTKYGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAIAAEEFAVVDVGDTTRRGIRRFIMAFERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIAIVDTMQTVMHYY-----FQTDSVESCVVETVNQGGDADTTGAIAGMLAGATYGVET--IPPRWLRKLDRDVYNEICAQVDGLLARAPAL
8MUSTER1pw4A20.0990.8490.817threading_8WYIAIANVFVYLLRYGILDWSPTY----LKEVKHFALDKS-----SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG---GSV-AASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEQLLQELVP---------------------
9SPARKS2xwub0.1290.9290.961threading_9MFTIGALSEWLPVMINSVLPLVLHALPELSVSSVSTLKKICRECMKQIHKTSQCMWLMQALGFLLSA--LQVEEILKNLHSLISPYIQQLEKLA-EEIPNPSNKLAIVHILGLLSNLFTTLDISHPN-----PVVVVLQQVFQLIQKVLSKWL---NDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQA-----SALDLTRQLVHIFAHEPAH
10PROSPECT22evuA0.1010.9241.211threading_10MVTFILVFFGAGSAAVTLMI---------ASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYAFPGREVVPYIIAQLLGAAFGSFIFLQCAG------IGAATVGGLGATAPFPGISYWQAMLAEVVGTFLL--MITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS

  Predicted Tertiary Structure

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TM-score=0.850 to 1pw4A
SCOP code=f.38.1.1		 TM-score=0.575 to 1fp3A
SCOP code=a.102.1.3		 TM-score=0.423 to 1nlxN
SCOP code=a.24.17.1		 TM-score=0.431 to 1nlxN
SCOP code=a.24.17.1		 TM-score=0.467 to 1lrzA
SCOP code=a.2.7.4