Template-based Modeling Results for HOFB_ECOLI

Submitted Primary Sequence

>Length 461
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
CCCHHHHHHHHHCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
55233012103312000011233100000111212300210110132311000023320221022023223222344322002001200210033301100010024101010101110020230233002000010100030111222113302010202311000100001032112000000132232130320112221021012005222000000002121110000000231232311000021112120210110212232111021001000231110000010211300100010021100000000111002001101312012110000001000110033003203533232231022123221201213102202210201000010020122012002232323101210342213101220020033121203101211223436
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
1	MUSTER	1p9wA	0.414	0.807	2.818	threading_1	-------------------------------------------------------------------SDDFFSLAEELAPIIKLIN-ALGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKV-AKLDIAEKRVPQDGRISLRIGA--VDVRVST-PSSHGERVV-RLLDKNATRLDLHSLGTAH-NHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPDVV-VGEIRDLETAQIAVQASLTGH-LVSTLHTNTAVGAVTRLRD-GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAG--EQAEKHIRATTPSIRDDGLDKVRQGITSLEEVRGS-------
2	PROSPECT2	2oap1	0.177	0.920	3.385	threading_2	LETPEFGSGSRIVEEYWIQEPFTKAIIVENEDEFAEVISALYDDLKKILQDVSVDLEERAEVLVRAIE----KTDNFYSRLYYLFRDFFGYGLITNVEDISCDGYNIPIFIYHQKYGNVETNIVLDQEKL-DRVLRLTQRSGKHISIANPIVDATLP---DGSRLQATFGTEVTPRGSSFTIRKFTIEPLTPDLIEKGTVPSGVLAYLWLAIEHKFSAIVVGETASGKTTTLNAIF---IPPDAKVVSIEDTREIKLYHENWIAEVTGEGEIDYDLLRAALRQRPDYIIVGEVRGREAQ--TLFQASTGHASYSTLHAGD-INQVYRLESEPLKVPRSLQFLDIALVQTWVRGNTRLRRT----------------KEVNEILGI----DPVDKNLLVNQFVKWDPKEDKHIEVSPKKLEKVQEVYDEL---SRKRYLELLKRGIRNYKEVTRYIHKEEGL
3	SPARKS	2oap1	0.188	0.922	4.417	threading_3	SRIVEEYWIQEPFTKAIIEDEFRNVYYALEPTVSSEEAEVISALYDKKILVLQDVSVDLEERAEVLVRAIEKTD-NFYSRLYYLFRDFFGYGLIDPLEDTN--------VEDISCDGYNIPIFIYHQKYGNVETNIVLDQEKLDRVLRLTQRSGIVDATLDGSRLQATFGTEVTPRGSSFTIRKFTIEPLTPDLIEKGTVPSGVLAYLWLAIEHKFSAIVVGETASGKTTTLNAI---FIPPDAKVVSIEDTREIKLYHIAEVTRTGGEGEIDYDLLRAALRQRPDYIIVGEVRGRE--AQTLFQASTGHASYSTLHAGD-INQVYRLESEPLKVPRSLQFLDIALVQTWVRGNTRLRRTKELGIDPVDKNLLVNQFVKWDPKED--------------KHIEVSPKKEKADFLGVSVQEVYDEL-------SRKRYLELLKRGIRNYKEVTRYIHARNPE
4	SP3	2oap1	0.186	0.931	4.706	threading_4	SRIVEEYWIQEPFTKAIIVENEDNVYYALEPTVSSEEAEVISALYDKKILVLQDVSVDLEERAEVLVRAIEKTDN-FYSRLYYLFRDFFGYGLIDPLEDTN--------VEDISCDGYNIPIFIYHQKYGNVETNIVLDQEKLDRVLRLTQRSGKHIVDADGSRLQATFGTEVTPRGSSFTIRKFTIEPLTPDLIEKGTVPSGVLAYLWLAIEHKFSAIVVGETASGKTTTLNAIF---IPPDAKVVSIEDTREIKLYHIAEVTRTGGEGEIDYDLLRAALRQRPDYIIVGEVRGRE--AQTLFQASTGHASYSTLHAGD-INQVYRLESEPLKVPRSLQFLDIALVQTWVRGNTRLRRT-----KEVNEILGIDPV-----DKNLLVNQFVKWDPKEDKHIEVSPKKEKADFLGVSVQEVYDEL-------SRKRYLELLKRGIRNYKEVTRYIHARNPE
5	SPARKS	1p9ra	0.415	0.794	6.780	threading_5	----------------------------------------------------------------------DFFSLAEEAPIIKLINA-LGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVA-KLDIAEKRVPQDGRISL-----AVDVRVST-PSSHGER-VVRLLDKNATRLDLHSLG-TAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPDV-VVGEIRDLETAQIAVQASLTGH-LVSTLHTNTAVGAVTRLRDG-IEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAGEQAE--KHIRATTPSIRDDGLDKVRQGITSLEEVRGS-------
6	PROSPECT2	2ewvA	0.331	0.714	3.578	threading_6	ELK---------------------------------------------------------------------------------ILEIIKEAIELGASDIHLTAGAP---PAVRIDGYIKFLKDFPR-LTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGGRFRANVFYQRGSVAAALRSLPAE--IPEFKKLGLPDK----VLELCHRKMGLILVTGPTGSGKSTTIASMIDYINTKSYHIITIEDPIEYVFKHKKSIVNQREVGESFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLRIVLSFILQGIISQRLLPKIGG-------------------------------------GRVLAYELLIPNTAIRNLIRENK----LQQVYSLMQMQTMNQTLYKLYKQGLITLEDAMEASPDPKEM
7	PPA-I	1p9wA	0.414	0.807	6.518	threading_7	-------------------------------------------------------------------SDDFFSLAEELAPIIKLINA-LGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKV-AKLDIAEKRVPQDGRISLRIGA--VDVRVST-PSSHGERVV-RLLDKNATRLDLHSLGTAH-NHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPDVV-VGEIRDLETAQIAVQASLTGH-LVSTLHTNTAVGAVTRLRD-GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAG--EQAEKHIRATTPSIRDDGLDKVRQGITSLEEVRGS-------
8	HHPRED-l	1p9r_A	0.440	0.794	7.100	threading_8	---------------------------------------------------------DFFSLAEE-------------APIIKLINA-LGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKV-AKLDIAEKRVPQDGRISL-----AVDVRVST-PSSHGERVV-RLLDKNATRLDLHSLG-TAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPDVV-VGEIRDLETAQIAVQASLTGHLV-STLHTNTAVGAVTRLRD-GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAGEQA-EKHIR-ATTPSIRDDGLDKVRQGITSLEEV-RGS------
9	HHPRED-g	1p9r_A	0.437	0.794	7.646	threading_9	---------------------------------------------------------DFFSLAEE-------------APIIKLINA-LGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKV-AKLDIAEKRVPQDGRISL-----AVDVRVST-PSSHGERVV-RLLDKNATRLDLHSLG-TAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPDVV-VGEIRDLETAQIAVQASLTGHLV-STLHTNTAVGAVTRLRD-GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAGEQA-EKHI-RATTPSIRDDGLDKVRQGITSLEEV-RGS------
10	SP3	1p9ra	0.410	0.794	6.861	threading_10	----------------------------------------------------------------------DFFSLAEEAPIIKLIN-ALGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVA-KLDIAEKRVPQDGRISLA-----VDVRVST-PSSHGER-VVRLLDKNATRLDLHSLGT-AHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD-TFARGLRAILRQDPD-VVVGEIRDLETAQIAVQASLTGH-LVSTLHTNTAVGAVTRLRDG-IEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRK--LFEPLILYRATGCPKCNKGYRGRTGIHELLLVDDALQELIHSEAG--EQAEKHIRATTPSIRDDGLDKVRQGITSLEEVRGS-------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.884 to 1p9wA SCOP code=c.37.1.11	TM-score=0.567 to 1g6oA SCOP code=c.37.1.11	TM-score=0.885 to 1p9wA SCOP code=c.37.1.11	TM-score=0.558 to 1g6oA SCOP code=c.37.1.11	TM-score=0.557 to 1p9wA SCOP code=c.37.1.11