Template-based Modeling Results for HNR_ECOLI

Submitted Primary Sequence

>Length 337
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
5533222110000212320120011003321010010220210020012211000000010141200200210253133000000002321210020031102000021033032012001101111222231331231131121012112101300331123233212202000100002222100000000133100000000141111000000002000100023212333331210110032003104312121100000000114220000010101010111211011221000000220213212330110101011221201001135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
1	MUSTER	3f7aB	0.228	0.950	2.096	threading_1	VS-----ATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDL-RPQIDGLELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVENQRYRDKLEAANRELQASLNLLQEDQNALPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFTTRLLYES-------RRFKPSEVLAHINRGLINTKLGKH-VTLGGVIDLEKNSLTYSIGGHLPLFVEGQAGYLEG---RVGLFDDATYDDRVELPPSFSLSLFSDGASLPEQVAAA
2	SPARKS	3eq2a	0.221	0.926	3.291	threading_2	-----VSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICD-LRPQIDGLELIRRIRQTASETPIIVLGVSD----AVEALRLGAADYLIKPLEDLAVLEHSVRRALDRYLRVENQRYRDKLEAANRELQASLNLLQEDQNAGRQVQNLPVTPWSIEGLEFSHRIISGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFTTRLLYESRRNGTLPEF-KPSEVLAHINRGLINTKLGKHVTL-GGVIDLEKNSLTYSIGGHPLPVLFVEGQAGYLEGRPVGLFDDADDRVE-----------LPPSFSLSLF--SD
3	PROSPECT2	3eq2A	0.214	0.958	3.987	threading_3	VS-----ATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDL-RPQIDGLELIRRIRQTASETPIIVLGVSD----AVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVEQRYRDKLEAANRELQASLNLLQEDQNAGRQVQNLPVTPWSIEGLEFSHRIISGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFTTRLLYES-RRNGTLPEFKPSEVLAHINRGLINTKLGKHVTL-GGVIDLEKNSLTYSIGGHLPLVLFVEGQAGYLEGRPVGLFDDADDRVELPPSFSLSLVFGLANLAALLVLS--
4	PPA-I	3f7aB	0.226	0.944	3.102	threading_4	-----VSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDL-RPQIDGLELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVENQRYRDKLEAANRELQASLNLLQEDQNALPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFTTRLLYES-------RRFKPSEVLAHINRGLINTKLGKH-VTLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRVGLFDDATYDDRVELPPSFSLSLFSDG-----ILDVG
5	HHPRED-l	3eq2_A	0.251	0.887	3.181	threading_5	-----VSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDLR-PQIDGLELIRRIRQTASETPIIVL------SDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVELEAANELQASLNLLQEDQNAGRQVQ---LPVTPWSIEGLEFSHRII-----SGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKF-TTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVT-LGGVIDLEKNSLTYSIGGHPLPVLEGQAGYLEGR--PVGLFDDA--DD-------RV-ELP-PSFSL--SLFS-
6	HHPRED-g	3eq2_A	0.237	0.914	2.735	threading_6	---V--SATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDLR-PQIDGLELIRRIRQTASETPIIVL------SDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVELEANRELQASLNLLQEDQNAGRQVQ---LPVTPWSIEGLEFSHRII-----SGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKF-TTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVT-LGGVIDLEKNSLTYSIGGHPLPVLEGQAGYLEGR--PVGLFDDA--DDRV-ELPPSFLSLFSDGILD--KEKEA
7	SP3	3eq2a	0.206	0.964	3.062	threading_7	VS-----ATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICD-LRPQIDGLELIRRIRQTASETPIIVLGVSD----AVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVENQRYRDKLEAANRELQALNLLQEDQNAGRQVQNLPVTPWSIEGLEFSHRIISGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFTTRLLYESRRNGTLPEF-KPSEVLAHINRGLINTKLGKHV-TLGGVIDLEKNSLTYSIGGHPLPVLFVEGQAGYLEGRPVGLFDDADDRVELPPSFSLSLTLKEKEASLPEQVAAA
8	SAM-T99	1ny5B	0.186	0.846	2.495	threading_8	-------MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPC-MLEEIELTINKAIEHRKLRKELLRREKDLKEEEYVFESP------------------------------------KMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKE-------PFVALNVASIPRDIFEAELFGYEKGAFGAVSSKEGFFELADGGTLFLDEIGELSLEA-QAKLLRVIESGKFYRLGKEIEVNVRILAATNRNIKELVKEG
9	MUSTER	3breB	0.164	0.849	1.218	threading_9	LDGAV---MVLLVDDQAMIGEAVRRSLASEGIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPRDIPIIVLSTKEEPTVKSAAFAAGANDYLVKLPD-AIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDG-----LTGL-SNRRH--FDEYLEMEWRRSLREQSQLSLLMIDVDYFG--HVAGDEALRQVAGAIREGCSRSSGTSPGGARLLAEKVRRTVESLQI---------------------------SHDQPRPGSHLT--VSIGVS-TLVPGGGGQTFRVL-----NNGNQVGLM--EQ
10	SPARKS	1ys6a	0.249	0.632	2.382	threading_10	------SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATSSSPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS----------RAQLLELVWGYDFAADTNV----VDVFIGYLRRKL-----EAGGGPRLLHTVRGVGFVLRMQ------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.631 to 1zh4A SCOP code=c.23.1.1	TM-score=0.629 to 1zh4A SCOP code=c.23.1.1	TM-score=0.603 to 1nxwA SCOP code=c.23.1.1	TM-score=0.608 to 1zh4A SCOP code=c.23.1.1	TM-score=0.627 to 1zh4A SCOP code=c.23.1.1