Template-based Modeling Results for HLDD_ECOLI


  Submitted Primary Sequence

>Length 310
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA
CEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCEEEHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCCEEHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA
2000000001000000210153122100000002211322122301001111131002100113312301000000001212222122001000200210020024240100000001012132232232432321101100011001200210031140200000001010032124111000001001102323202002113301100000000010001002212110000011310002100200131243131210212341324122101000210131022312220120012001102535
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA
1MUSTER2x6tG0.9970.9943.577threading_1MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR--
2SPARKS2c20a0.2680.9743.236threading_2SILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGHEDAIGAKFYNGDLRD-KAFLRDVFTQE---NIEAVMHFAADSLVGVSMPLQYYNNNVYGALCLLEVMDEFKVDFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATEDHRPETHLIPLVLQVALGQREKIMMFGDDGTCIRDYIHVEDLVAAHFLGLKDGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV---APRRAGDPARLVASSQKAKEKLGWDPRYNVKTIIEHAWNWHQKQP
3PROSPECT21sb8A0.2280.9743.650threading_3MWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRWSNFKFIQGDIRNLDDCNNAC------AGVDYVLHQAALGSVPRSINDPSNATNIDGFLNMLIAARDAKVQFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYIN-GDGETSRDFCYIENTVQANLLAATAGRNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMFK
4PPA-I2x6tG0.9970.9944.930threading_4MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR--
5HHPRED-l1eq2_A1.0000.8772.091threading_5MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA-SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-------------KRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADAT---------------------YQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLN---
6HHPRED-g1eq2_A1.0000.8772.081threading_6MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA-SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-------------KRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADAT---------------------YQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLN---
7SP32c20a0.2680.9743.350threading_7SILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGHEDAITAKFYNGDLRD-KAFLRDVFTQE---NIEAVMHFAADSLVGVSMPLQYYNNNVYGALCLLEVMDEFKVDFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATEDHRPETHLIPLVLQVALGQREKIMMFGDDGTCIRDYIHVEDLVAAHFLGLKDGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV---APRRAGDPARLVASSQKAKEKLGWDPRYNVKTIIEHAWNWHQKQP
8SAM-T992x6tG0.9970.9943.519threading_8MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR--
9MUSTER2p5uA0.2810.9652.660threading_9MVLVTGGAGFIGSHIVEDLLARGL-EVAVLDNLATGKRENVPVPFFRVDLRD-KEGVERAFREF---RPTHVSHQAAQASVKVSVEDLDFEVNLLGGLNLLEACRQYGVELVFASTGAIYGEPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLK-GLPVTLYARKEGCVRDYVYVGDVAEAHALALFS-LEGIYNVGTGEGHTTREVLMAVAEAAGKA-PEVQ--PAPPRPGDLERSVLSPLKLMAH-GWRPKVGFQEGIRLTVDHFRGAV
10SPARKS3ko8a0.2390.9193.213threading_10MIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREFVNPSLHVRDLKDYSWG--------AGIKGDVVFHFAANPEVRLSTPIVHFNENVVATFNVLEWARQTGVRVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG-----VIYDFIMKLRRNPN----VLEVLQRKSYLYVRDAVEATLAAWKKAPFLALNVGNVDAVRVLDIAQIVAEVLGLR-------PEIRLVGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.843 to 1rpnC
TM-score=1.000 to native
SCOP code=c.2.1.2		 TM-score=0.843 to 1rpnC
TM-score=1.000 to native
SCOP code=c.2.1.2		 TM-score=0.889 to 1a9yA
TM-score=0.855 to native
SCOP code=c.2.1.2		 TM-score=0.921 to 1sb8A
TM-score=0.864 to native
SCOP code=c.2.1.2		 TM-score=0.843 to 1rpnC
TM-score=1.000 to native
SCOP code=c.2.1.2

  Experimental Structure

Download 2x6tG
SCOP code=c.2.1.2