Template-based Modeling Results for HEMH_ECOLI

Submitted Primary Sequence

>Length 320
MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
55432100000001113222131013003200113310301210011002000122123300210210123220111110220121014302302000000102010320021023331210000000121011101100210030034342101010022102023002000200220014223320000011100220133112112102100210021021233200000003212231020103300310143211100000001003002002200220120032121320200101210220020012003225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR
1	MUSTER	1hrkA	0.270	0.972	2.500	threading_1	-RKPKTGILMLNMGGPETL--GDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLDPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC-NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEGVENIRRAESLNGNPLFSKALADLVHSHI
2	SPARKS	1hrka	0.273	0.972	6.648	threading_2	-RKPKTGILMLNMGGPE--TLGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLDPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC-NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKCGVENIRRAESLNGNPLFSKALADLVHSHI
3	PROSPECT2	1hrka	0.270	0.972	3.793	threading_3	-RKPKTGILMLNMGGPE--TLGDVHDFLLRLFLDRDLMTLPI---QNKLAPFIAKRLTPKIQEQYRR--IGGGSPIKIWTSKQGEGMVKLLAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLE-YCNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSVLAKECGVENIRRAESLNGNPLFSKALADLVHSHL
4	PPA-I	1hrkA	0.270	0.972	3.551	threading_4	-RKPKTGILMLNMGGPETLG--DVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC-NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEGVENIRRAESLNGNPLFSKALADLVHSHI
5	HHPRED-l	3hcn_A	0.271	0.969	7.535	threading_5	-RKPKTGILMLNMGGPET--LGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRRTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLDPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN-PYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVAKECGVENIRRAESLNGNPLFSKALADLVHSH-
6	HHPRED-g	1lbq_A	0.262	0.966	6.469	threading_6	--RSPTGIVLMNMGGPSKVE--ETYDFLYQLFADNDLIPISAKYQKTIAK-YIAKFRTPKIEKQYREIG--GGSPIRKWSEYQATEVCKILDPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSWSVIDRWPTNEGLIKAFSENITKKLQEFPQKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFK-NPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGVIG--ESEYKDKFKRCESLNGNQTFIEGMADLVKSHL
7	SP3	1hrka	0.273	0.972	6.292	threading_7	-RKPKTGILMLNMGGPE--TLGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIG--GGSPIKIWTSKQGEGMVKLLDPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC-NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKCGVENIRRAESLNGNPLFSKALADLVHSHI
8	SAM-T99	1hrkA	0.273	0.972	7.127	threading_8	-RKPKTGILMLNMGGPE--TLGDVHDFLLRLFLDRDLMTLPI---QNKLAPFIAKRLTPKIQEQYRRI--GGGSPIKIWTSKQGEGMVKLLDEHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNP-YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHI
9	MUSTER	1lbqA	0.269	0.966	2.457	threading_9	--RSPTGIVLMNMGGPSKVE--ETYDFLYQLFADNDLIPISAK-YQKTIAKYIAKFRTPKIEKQYREIG--GGSPIRKWSEYQATEVCKILDPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKF-KNPYRLVWQSQVGPKPWLGAQTAEIAEFLGP-KVDGLMFIPIAFTSDHIETLHEIDLGVI--GESEYKDKFKRCESLNGNQTFIEGMADLVKSHQ
10	SPARKS	1doza	0.254	0.922	6.125	threading_10	-SRKKMGLLVMAYGTPY--KEEDIERYYTHIRRGRKP----------------EPEMLQDLKDRYEAI--GGISPLAQITEQQAHNLEQHLNEFKAYIGLKHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG-GLTITSVESWYDEPKFVTYWVDRVKETYASMPENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGV--SEYAVGWQSEGNPDPWLGPDVQDLTRDLFEQGYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGAS-YYRPEMPNAKPEFIDALATVVLKKL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.914 to 1hrkA SCOP code=c.92.1.1	TM-score=0.913 to 1hrkA SCOP code=c.92.1.1	TM-score=0.913 to 1hrkA SCOP code=c.92.1.1	TM-score=0.911 to 1hrkA SCOP code=c.92.1.1	TM-score=0.912 to 1hrkA SCOP code=c.92.1.1