Template-based Modeling Results for HEM4_ECOLI

Submitted Primary Sequence

>Length 246
MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ
CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHCCEEEEECHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCEEECCCCCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ
211100122210330021033111200100001001033132012002301301000000210010011002323331231010000032002003302132110133331120001002222222220100102212320020023220202101001101232212200110333311000010030022002102211222112302000003200200451213101003302232013114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ
1	MUSTER	3re1A	0.261	0.967	2.351	threading_1	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWPQPP-MQPWFSVGSATGQILLDYGLDASW--PALLDHPRLKQAIA---VPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDS--WPDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAALR
2	SPARKS	3re1a	0.261	0.967	4.109	threading_2	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWPQPP-MQPWFSVGSATGQILLDYGLDASW--PALLDHPRLKQAI---AVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDSW--PDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAALR
3	PROSPECT2	3re1A	0.261	0.967	3.655	threading_3	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWPQ-PPMQPWFSVGSATGQILLDYGL-DASWPALLDHPR----LKQAIAVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDS--WPDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAALR
4	PPA-I	3re1A	0.256	0.967	2.573	threading_4	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWP-QPPMQPWFSVGSATGQILLDYGLDASWPALLDH-----PRLKQAIAVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDS--WPDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAALR
5	HHPRED-l	1jr2_A	0.170	0.980	5.104	threading_5	MKVLLLDAKEDQDPYIRELGLYGLEATLIPVLSFEFLS-LPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTKWNAKSVYVVGNATASLVSKIGLDTEG-E-TCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYQQGVPASITFFSPSGLTYSLKHIQELSG-DNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGI-
6	HHPRED-g	1wcw_A	0.163	0.976	4.095	threading_6	VRVAYAGLR-RKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEAKAFRLARGAKAARALKEAGLPPHAVGDG--TSKSLLPLLP---QGRGVAALQLYGKPLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKAEALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFK
7	SP3	3re1a	0.256	0.967	4.682	threading_7	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWPQPP-MQPWFSVGSATGQILLDYGLDASW-PALLDHPRLKQAI----AVPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDSW--PDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAALR
8	SAM-T99	3re1A	0.274	0.951	4.999	threading_8	WRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKPAARLAIELIDEVWPQPPM-QPWFSVGSATGQILLDYGLDA-SWPAL-------LDHPRLKQAPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDSW--PDLAGLPLFVPSPRVASLAQAAGARNVIDCRGASAAALLAAL-
9	MUSTER	3mw8A	0.365	0.947	2.317	threading_9	GKLLLTRPEGKNAA-ASALDALAIPYLVEPLLSVEAAAV---TQAQLDELSRADILIFISTSAVSFATPWLKDQWPK----ATYYAVGDATADALALQGITAERSPQAT---EGLLTLPSLEQVSGKQIVIVRGKGGRE-AADGLRLRGANVSYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSGEVLENLINLVPKDS-FAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDALG
10	SPARKS	3mw8a	0.365	0.947	3.899	threading_10	GKLLLTRPEGKNAA-ASALDALAIPYLVEPLLSVEAAAVT---QAQLDELSRADILIFISTSAVSFATPWLKDQWPK----ATYYAVGDATADALALQGITAERSPQA---TEGLLTLPSLEQVSGKQIVIVRGKGGRE-AADGLRLRGANVSYLEVYQRACPPLDAPASVSRWQSFGIDTIVVTSGEVLENLINLVPKDS-FAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDALG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.683 to 1jr2A SCOP code=c.113.1.1	TM-score=0.686 to 1jr2A SCOP code=c.113.1.1	TM-score=0.688 to 1jr2A SCOP code=c.113.1.1	TM-score=0.682 to 1jr2A SCOP code=c.113.1.1	TM-score=0.680 to 1jr2A SCOP code=c.113.1.1