Template-based Modeling Results for HEM3_ECOLI

Submitted Primary Sequence

>Length 313
MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHCCCCEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA
5532202000140200110021012101311321201001021422222311013021200003101200133300000000320113113210000003331121000013232132022001000112210010123223010110302011102202323010000000003202132322011113200101110000000123122012002102133011101011000230312030100000202322010100001241221020222012310230012002201420032002202423234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA
1	MUSTER	1ah5A	0.969	0.939	3.439	threading_1	--DNVLRIATRQSPLALWQAHYVKDKLAS-HPGLVVELVPVTR-------------GDKGLFVKELEVALLENRADIAVHS-KDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERANTR-LEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQ-GISLAEELLNNGAREILAEVYNGDAPA
2	SPARKS	1pda_	1.000	0.946	7.771	threading_2	--DNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVI---------GKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVY------
3	PROSPECT2	3ecrA	0.453	0.911	5.434	threading_3	M--RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAML-------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHL--ECSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATQLAAQNLGISLANLLLSKGAKNILDVARQ-----
4	PPA-I	1ah5A	0.966	0.939	6.027	threading_4	--DNVLRIATRQSPLALWQAHYVKDKLAS-HPGLVVELVPVTR-------------GDKGLFVKELEVALLENRADIAVHS-KDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERANTR-LEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAE-QGISLAEELLNNGAREILAEVYNGDAPA
5	HHPRED-l	1gtk_A	1.000	0.936	9.886	threading_5	--DNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAP-
6	HHPRED-g	3ecr_A	0.460	0.911	8.341	threading_6	M--RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAM-------------------LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE--CSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATQLAAQNLGISLANLLLSKGAKNILDVARQ-----
7	SP3	1pda_	1.000	0.946	7.705	threading_7	--DNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVI---------GKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVY------
8	SAM-T99	1ah5A	0.976	0.939	9.458	threading_8	--DNVLRIATRQSPLALWQAHYVKDKLASH-PGLVVELVPVTR-------------GDKGLFVKELEVALLENRADIAVHS-KDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERA-NTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQ-GISLAEELLNNGAREILAEVYNGDAPA
9	MUSTER	3ecrA	0.460	0.911	2.934	threading_9	M--RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAM-------------------LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE--CSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATQLAAQNLGISLANLLLSKGAKNILDVARQ-----
10	SPARKS	3eq1a	0.451	0.907	6.956	threading_10	---RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAF---------------------TKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATQLAAQNLGISLANLLLSKGAKNILDVARQ-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.963 to 1ah5A TM-score=0.993 to native SCOP code=c.94.1.1	TM-score=0.963 to 1ah5A TM-score=0.993 to native SCOP code=c.94.1.1	TM-score=0.954 to 1ah5A TM-score=0.983 to native SCOP code=c.94.1.1	TM-score=0.910 to 1ah5A TM-score=0.938 to native SCOP code=c.94.1.1	TM-score=0.963 to 1ah5A TM-score=0.993 to native SCOP code=c.94.1.1

Experimental Structure

Download 1ah5A

SCOP code=c.94.1.1