Template-based Modeling Results for HDFR_ECOLI

Submitted Primary Sequence

>Length 279
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCEEEEEHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
441310200110042210020031021110211110230042121100212212020021012002102300210220132123223212000000110020000300010121133011010102212231003102333000000011242440200100213000001220312231100103200100100020022332100101203000200132100000000003432100102322202110000002323222003200202112313
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY
1	MUSTER	1iz1B	0.172	0.978	2.807	threading_1	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTST---PTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFPRGGRFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKE-KQPPILARFVEHVRR--SA
2	SPARKS	1iz1a	0.172	0.978	5.022	threading_2	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFPRGGSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA--
3	PROSPECT2	1iz1a	0.172	0.978	4.184	threading_3	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFAVELTLFGGRPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARVGTRVKVPISCIFRKEKQP-PILARFVEHV--RRSA
4	PPA-I	1iz1B	0.171	0.986	4.431	threading_4	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAFLTST---PTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKRAVELTLFGGRPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKE-KQPPILARFVEHVRRSAKD
5	HHPRED-l	1ixc_A	0.163	0.943	3.398	threading_5	-EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRARGDVGELSVAYFGTPIYRSLPLLLRAF---LTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGVELTLFPRRPSFADELFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAIRPDIAFARVGTRVKVPISCIFRKEK-QPPILARFVEHVR-RSA-
6	HHPRED-g	1al3_A	0.073	0.688	3.005	threading_6	------------------------------------------------------------------------------------WPDKGSLYVATTHTQARYALPGVIKGF---IERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALLYDDLVMLPCYHWNRSIVVTPEHPLATQYPLVTYTFGFTGRSELDTAFGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTF
7	SP3	1iz1a	0.176	0.978	5.179	threading_7	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAADVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFAVELTLFPRGPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA--
8	SAM-T99	1iz1B	0.167	0.986	3.220	threading_8	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARDVGELSVAYFGTPIYRSLPLLLRAFLT---STPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGLRAVELTLFPRGPSFADEVIGLFGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVRVKVPISCIFRKEKQ-PPILARFVEHVRRSAKD
9	MUSTER	3fxrA	0.153	0.986	2.748	threading_9	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFAREF---PDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKIDTDLEAQPLYVSDVVIVGQRQHPMAQECRWAFSSAPRGPGAIIRNAFGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNDQLCSILQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-
10	SPARKS	3fxra	0.149	0.986	4.877	threading_10	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQGRWEGHITFAASPAIALAALPLALASFARE---FPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMANECRWAFSSAPRGPGAIIRNAFGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL-

Predicted Tertiary Structure


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TM-score=0.796 to 1iz1B SCOP code=a.4.5.37	TM-score=0.782 to 1iz1B SCOP code=a.4.5.37	TM-score=0.774 to 1iz1B SCOP code=a.4.5.37	TM-score=0.764 to 1iz1B SCOP code=a.4.5.37	TM-score=0.851 to 1iz1B SCOP code=a.4.5.37