Template-based Modeling Results for HCAF_ECOLI

Submitted Primary Sequence

>Length 172
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEEEECEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
5533222311120020002001101222032003001320101011222232333432232210000021131012001202221000222301010000001012134332010100000010233332100000100201113332020111100022111113200001
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
1	MUSTER	1wqlB	0.366	1.000	2.745	threading_1	PEMPVSLELQNAVEQFYYREAQLLDYQNYEAWLALLTQDIQYWMPIRTTHTSRNKAMEVPPGGNAHFDETYESMRARIRARVSGLNWTEDPPSRSRHIVSNVIVRETESAGTLEVSSAFLCYRNRLERMTDIYVGERRDILLRVSDGGFKIAKRTILLDQSTITANNLSQFF
2	SPARKS	2b1xb	0.329	0.971	4.552	threading_2	---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
3	PROSPECT2	3gzxB	0.384	1.000	3.206	threading_3	MAKPVSLELQHQVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEVPAGANAHFDDTHATMYGRIRQKTSDLNWAEDPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADNPGFQIAKRTIILDQSTVLANNLSVFF
4	PPA-I	2b1xB	0.329	0.971	5.899	threading_4	---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
5	HHPRED-l	1uli_B	0.306	0.988	4.451	threading_5	KPAPVDPSLQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQESGAREYAHFDDNAQMMRGRLRKITSDVSWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIF-AGERKDILRRTGAGFELAKRTILIDQSTILSNNLSFF-
6	HHPRED-g	1uli_B	0.310	0.994	4.415	threading_6	KPAPVDPSLQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAEYSGAREYAHFDDNAQMMRGRLRKITSDVSWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIF-AGERKDILRRTGSGFELAKRTILIDQSTILSNNLSFFF
7	SP3	2gbwb	0.278	0.983	4.264	threading_7	-QIPVTPDVHYDIEAHYRAEVRMFQTGQYREWLQMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVWMEDPPSKIRYFVSNVEAFEAG-NGELDVLSNILVYRNRRQT-EVTVHTLGREDKLRRDGNGFKVFRRKLILDARVTQDKNLYFFC
8	SAM-T99	3en1B	0.320	1.000	4.968	threading_8	KPAPVAPELQHEVEQFYYWEAKLLNDRRFEEWFALLAEDIHYFMPIRTTRIMRDSLEYSGSREYAHFDDDATMMKGRLRKITSDVSWSENPASRTRHLVSNVMIVGAEAEGEYEISSAFIVYRNRLERQLDIFAGERRDTLRRNTSEGFEIVNRTILIDQSTILANNLSFFF
9	MUSTER	2b1xB	0.329	0.971	2.733	threading_9	---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
10	SPARKS	2gbwb	0.278	0.983	4.524	threading_10	-QIPVTPDVHYDIEAHYRAEVRMFQTGQYREWLQMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVWMEDPPSKIRYFVSNVEAFEAG-NGELDVLSNILVYRNRRQT-EVTVHTLGREDKLRRDGNGFKVFRRKLILDARVTQDKNLYFFC

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.967 to 1wqlB SCOP code=d.17.4.4	TM-score=0.980 to 2b1xB SCOP code=d.17.4.4	TM-score=0.958 to 2b1xB SCOP code=d.17.4.4	TM-score=0.935 to 1wqlB SCOP code=d.17.4.4	TM-score=0.958 to 2b1xB SCOP code=d.17.4.4