Template-based Modeling Results for HCAB_ECOLI

Submitted Primary Sequence

>Length 270
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEECCCEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
452232100000000100010001101421010000102221012004411320000101011221022002200340030000000000123211123112302220022001000100000010002101423000000000011221110000000110010001200120033010000000002031202212232322212220021012101131112011000000000022223001010000110000101222221244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
1	MUSTER	1bdbA	0.477	0.963	2.343	threading_1	M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRG---------PSSLGPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
2	SPARKS	1bdb_	0.485	0.963	1.978	threading_2	-MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
3	PROSPECT2	1bdb_	0.488	0.963	3.640	threading_3	M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGP---------LADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
4	PPA-I	1bdbA	0.485	0.963	1.925	threading_4	-MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
5	HHPRED-l	3ak4_A	0.257	0.937	1.541	threading_5	IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR-----PAVDITDEEWDFNFDVNARGVFLANQIACRHFLASKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPNIRVNCVCPGFVKTAMQEREIIWEAELRMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR-FMTGQGINVTGGVRMD-----------
6	HHPRED-g	3ak4_A	0.257	0.937	1.326	threading_6	IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP-----AVDITDEEWDFNFDVNARGVFLANQIACRHFLASTGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAKNIRVNCVCPGFVKTAMQEREIIWEAERGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA-RFMTGQGINVTGGVRMD-----------
7	SP3	1bdb_	0.488	0.963	1.950	threading_7	M-KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLG---------PLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDL
8	SAM-T99	2uvdA	0.229	0.889	1.322	threading_8	--MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNQKANEVVDEIGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDN-----LLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASNITVNAIAPGFIATDMTDVL----------DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ-SKYITGQTLNVDGGMVM------------
9	MUSTER	1ydeF	0.260	0.941	2.225	threading_9	T-RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP----QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPGVRVNCISPGNIWTPLWEELAALMPDPRAS----IREGMLAQPLGRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGGAELGYGCKASR----
10	SPARKS	3ak4a	0.253	0.937	1.965	threading_10	IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVD-----ITDEEWDFNFDVNARGVFLANQIACRHFLASNGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPNIRVNCVCPGFVKTAMQEREIIWEELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR-FMTGQGINVTGGVRMD-----------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.913 to 1bdbA SCOP code=c.2.1.2	TM-score=0.927 to 1bdbA SCOP code=c.2.1.2	TM-score=0.964 to 1bdbA SCOP code=c.2.1.2	TM-score=0.949 to 1bdbA SCOP code=c.2.1.2	TM-score=0.964 to 1bdbA SCOP code=c.2.1.2