Template-based Modeling Results for GSPK_ECOLI

Submitted Primary Sequence

>Length 327
MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCEEECCEEEEEEEEEEECCEEEEEEEEEEEECCCCEEEEEEECCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY
553222000100000000000000010021011102112211202111011200120001001211333333111322102123232332220201021132000010003223332222320020010003202133210220020002101323213241131111212112211222211201001213212330022011000001323120000002320010010011330232102200331343112203100110132122132112213420112120010102010331200110100124543202001122434
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY
1	MUSTER	3ci0K	0.327	0.850	2.676	threading_1	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTAS---RPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLAQ--PLLADVDRTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES-
2	SPARKS	3ci0k	0.342	0.850	6.635	threading_2	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQ---PTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFL--AQPLLADVDRTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES-
3	PROSPECT2	3ci0K	0.312	0.853	4.435	threading_3	G-----------------------------------RTRSQQEYQQALWYSASAESLALSALSLSL-KNEKRVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTAS---RPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVTRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDAR-------ALLQQRPAKGWEDVDQFLAQPLLADVD-ERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQ-HFSVLWHQTGES
4	PPA-I	3ci0K	0.323	0.853	4.076	threading_4	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRP---LAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLAQPLLADVDER-TKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES-
5	HHPRED-l	3ci0_K	0.329	0.847	11.484	threading_5	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNE-KRVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTA---SRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVTRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLAQPL--LADVDRTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ-TGE-
6	HHPRED-g	3ci0_K	0.326	0.853	10.658	threading_6	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTA---SRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLAQPLLADVDE-RTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES-
7	SP3	3ci0k	0.338	0.850	1.511	threading_7	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSL-KNEKRVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQ---PTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLA--QPLLADVDRTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES-
8	SAM-T99	3ci0K	0.326	0.844	7.706	threading_8	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGRFFPL-PQGQIAVTLRDAQACFNLNALAQPTTASR---PLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEAL-FD------ARALLQQRPAKGWEDVDQFLAQPLLADVD-ERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTG---
9	MUSTER	3ci0K1	0.300	0.520	1.104	threading_9	-----------------------------------GRTRSQQEYQQALWYSASAESLALSALSLSLKNEK-RVHLEQPWASGPRFFPLPQGQIAVTLRDAQA---------------------------------------------------------------------------------------------------------------QQININTLDVTQSVILEALFD-------ARALLQQRPAKGWEDVDQFLAQ--PLLADVDETKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQ-HFSVLWHQTGES
10	SPARKS	3rcea	0.093	0.884	0.742	threading_10	ALRA--GLRFTIYA--VPVMALGFGYFLYAFFNFLEKKQIKLSLRNKNILLILIAFFSISPALMHIYYYKSSTVFTSYEANDLKNKAQREDYVVAPIRYYSD-------VKTLIDGGKHLGKDNFFSSFVLSK---EQIPAANMARLSVEYTE---KSFKENYPDVLKAMVK------DYNQTSAKDFL--ESLNDKNFK--------FDTNKTRDVYIYMPYRMLRIMPVVAQANTNPDN-----GEQEKSLFFSQANAIAQDGSVMLDNGVEIINDFRALKVEGASIPLKAFVDIESITNGKFYYNEIDSKAQIYLLFLREYKSF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.913 to 3ci0K SCOP code=a.60.16.1	TM-score=0.917 to 3ci0K SCOP code=a.60.16.1	TM-score=0.916 to 3ci0K SCOP code=a.60.16.1	TM-score=0.819 to 3ci0K SCOP code=a.60.16.1	TM-score=0.918 to 3ci0K SCOP code=a.60.16.1