Template-based Modeling Results for GSPC_ECOLI

Submitted Primary Sequence

>Length 271
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCEECHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHCCCCCCCHHHHHHHCCCCCEEECCCEEEEEEECCCCHHHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ
4441301110121112000000000000000000001022212211312323232232311111013233322233232122323223010000000012334200000122322210012221321201102201310000122122110212322332232332323310121131211222320100201223223002203023000001013110221320030023023321020202132121200010031223322433435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ
1	MUSTER	2zleB	0.114	0.779	0.957	threading_1	LTAIKM----ADSDA----------LRVGDYTVAIGNFGLGETVTSGIV-------------SALGREN----QTDAAINRGNSGGALVNLN--GELIG-----NTAILAPDG--GNIGIGFAIPSNMVKNLTSQ------MVEYGQVKRGELGIMGTELNS--------ELAKAMKV------DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFN
2	SPARKS	3qo6a	0.129	0.771	2.676	threading_2	LRPIPV----GVSAD----------LLVGQKVFAINPFGLDHTLTTGVISGLRREISSAAT----GRPIQDVIQTDAAINPGNSGGPLLDSS--GTLIG----INTAIYSPSG--ASSGVGFSIPVDTVGGIVDQ------LVRFGKVTRPILGIKFAP----------DQSVEQLGVS---------GVLVLDAPPSGPAGKAGLQSGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP-----------
3	PROSPECT2	1y8tA	0.098	0.867	1.583	threading_3	GS------------------VEQVAAKVVPSVVLETDLEELILTNNHVIAAAAPSDGRTAPFTVVGADPTQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVT------TGIVSALNRPVSTNTVLDAIQTNSGGALVNNAQLVGVNSAIATLQSGSIGLAKRIADELISTGKASHASLGVQVTGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDSGGSRTVQVTLGK------------A
4	PPA-I	2l97A	0.110	0.469	1.681	threading_4	--------------------------------------------------------------------------------------------------------------------MEGLGFAIPANDAINIIEQLEK------NGKVTRPALGIQMVNLSNVS-----TSDIRRLNIPS-NVTSGVIVRSVQSNMPA----NGHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKL------------
5	HHPRED-l	2i4s_A	0.212	0.365	2.529	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------GA--EDKVDAIREAIARNPQEIFQYVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGD-AVALNGLDLTDPNV-NTLFQS-NE-TE-SLTVERDGQQHDVYIQF---------------
6	HHPRED-g	1ky9_A	0.100	0.771	3.290	threading_6	SDGRKFDAK-VGKDPRSDIALIQIQNRVGDYVAIGNPFGLGETVTSGIVSALGRSG------------YENFIQTDAAINRGNAGGALVNLN------GELIGINTAILAPDG--GNIGIGFAIPSN-VKNLTSQ-------VEYGQVKRGELGI-GTELNSELAKA-KVDAQ--------------RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGT-PVGSKLTLGLLRDGKQVNVNLE----------------
7	SP3	3pv2a	0.145	0.764	2.657	threading_7	LKSLVI----GD---SDKL-------EVGDFVVAINPFGLSQSATFGIVSALKN-----------------FIQTDAAINPGNSGGALVN--AKGELIG----INTAILV--------GIGFAIPINMVKDVAQQ------IIKFGSIHRGLMGIFVQHLT--------PELAQAMGY-----PEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNP
8	SAM-T99	2zleB	0.090	0.616	3.012	threading_8	---------------------------------------------------------------------------------------SDGRKFDAKMVGKDPRSDIALIQIQADSDALRVGDYTRGNSGGALVNIGINTAILAPDG--GNIGIGFAIPKNLTSQMVEYGQVKRGELGISELAKADAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLEL---------------
9	MUSTER	3stjA	0.144	0.771	0.928	threading_9	LTQIAI----ADSDK----------LRVGDFAVAVGPFGLGQTATSGIVSALGRSGLNLEGLENFIQ-------TDASINRGNSGGALLNLN--GELIG-----NTAILAPGG--GSVGIGFAIPSNMARTLAQQ------LIDFGEIKRGLLGIKGTEMS--------ADIAKAFNL------DVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS------------
10	SPARKS	3pv2a	0.156	0.756	2.600	threading_10	LKSLVI----GD---SDKL-------EVGDFVVAINPFGLSQSATFGIVSALKN-----------------FIQTDAAINPGNSGGALVNAELIGINTAILV----------------GIGFAIPINMVKDVAQQ------IIKFGSIHRGLMGIFVQHLT--------PELAQAMGY-----PEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNP

Predicted Tertiary Structure


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TM-score=0.677 to 2zleB SCOP code=b.36.1.4	TM-score=0.484 to 1te0A SCOP code=b.36.1.4	TM-score=0.580 to 2z9iA SCOP code=b.36.1.4	TM-score=0.769 to 2z9iA SCOP code=b.36.1.4	TM-score=0.495 to 1te0A SCOP code=b.36.1.4