Template-based Modeling Results for GSPA_ECOLI

Submitted Primary Sequence

>Length 489
MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEEEECCEEEEEEEEEECCCEEEEEECCEEEEECHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK
543212101210022232110000002111001100010043234310100001023021110011002223023322211220012002102423330000001102213330021021012022301000112232321221131000001002023310320011002115232102230021003003102210010000000111133222122310210032123343332100000000000000011112222222212221232222243311331121123223000100000122022321101102322110221212031012231000010213423000000111322010111311120113101201212010002112313220243223310110120033023222322221332012102201422503111100210010012112221221333232223222435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK
1	MUSTER	1fnnA	0.145	0.679	1.109	threading_1	LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTARFVYINGFIYNFTAIIGEIARSLNIPFPRRLSRDEFLALLVEHLRERDL-YMFLVLDDAFNLAPDILSTFIRLGQEAFRIALVIVGH-NDAVLNNLDPSTR-VIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYIT-----------------------FGDAEESYKIVCEEYGERPRV----HSQLWSY----------LNDLREKG---IVETRQNTT-----LISIGTEPLDTLE-----AVITKLIKEELR--------------------------------------------------------------------------------------------------------
2	SAM-T99	3bkhA1	0.254	0.129	1.831	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLRKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAEL--------------------------
3	PROSPECT2	2fnaA	0.111	0.609	1.807	threading_3	KDNRKEKEIEKLKGLRAP--ITLVLGLRRTGKSSIIKIGINELNLPYIYLDFEERNYISYKDFLLELQKEINKLVKRLPSLLKAFANLLESFEQASKDNVIIVLDEAQELGVNLLPALAYAYDNLKRIKFISGSEGLLYDYSPLFGRAFSTVELKPFSREEAIEFLRRGFQEAD----IDFKDYEVVYEKIGGIPGWLTYFGFIYLDNKNLDF---AINQTLEYAKKLI-----------------------------------------------------LKEFENFLHGREIARKRYLN---------------------------------------------------------------------------------------------------IRTLSKCGKWSDVKRALELEEGIEIS-----DSEIYNYLTQLTKHSWIIKEGPSEPLISLAF-------------------------S
4	SAM-T99	1lbuA1	0.227	0.135	1.750	threading_4	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WSG--------------TLSEGSSGEAVRQLQIRVAGYPGAQLAIDGQFGPATKAAVQRFQSAYGLAADGIAGPATFNKI--------------------------
5	SPARKS	1fnna2	0.134	0.474	2.020	threading_5	LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTARFVYINGFIYNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQELGAFRIALVIVGNDAVLNNLDPSTRYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	SAM-T99	1lbuA	0.227	0.135	1.733	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WSG--------------TLSEGSSGEAVRQLQIRVAGYPGAQLAIDGQFGPATKAAVQRFQSAYGLAADGIAGPATFNKI--------------------------
7	PPA-I	1fnnA	0.128	0.640	1.834	threading_7	LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEAFRIALVIVGHLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYIT-----------------------FGDAEESYKIVCEEYGERPRVHSSYLNDLREKGIVETRQNTTIKEELR---------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	1w36B1	0.078	0.916	1.552	threading_8	MSETLDPLR------LPLQGERLIEASAGTGKTFTYLRLLLGLGGSAA-----FPRPLTVEENIHELRIACLRETTDNPLYERLLEQWLLLAERQMDEAAVFTIHGFC---QRMLNLNAFESGMLFEQQL----IEDESLLRYQACADFWRRHCYPLPREIAQVVPQALLRDINRYLQGETRALAEIRETSESGEVLAAAIRTRRIFRRIWHHQPETDIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGD----------DARPVRADALTLLEIPSVYLSNRDRLVQIVTIHKSKGLEYPLVWLPFITNFR--------VQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEPLVRRRGDKKGDTDVHQSALGRL-----LQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPQVNDV
9	HHPRED-l	2qby_A	0.143	0.658	1.648	threading_9	LPHRIRKIASILAPLEEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKKFKHVYINTQIDTPYRVLADLLESLDVKVPFTLSIAELYRRLVKAVR-DYGSQVVIVLDEIDAFVDDILYKLSRINSEVN-ISFIGITNDVKLLDPRVKSSLSEEIIFPPYNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAGDARRALDLLRVSGEIAERMKDTKVKEEYVYMAKEEIERDRVRD-II-LTLPFHSLVLMAVVSIS-----------------VS----TTGA-------VYETYLNICKKLGVEAVTQSDIINELDMVGILTAKVV------------------NRGGKTKEIGLAVDKNIIV------------RSLIES-D--------------------------------------------------------------------------------------------------------
10	SAM-T99	3bkhA	0.254	0.129	1.541	threading_10	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLRKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAEL--------------------------

Predicted Tertiary Structure


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TM-score=0.732 to 1fnnA SCOP code=a.4.5.11	TM-score=0.410 to 1su3B SCOP code=a.20.1.2	TM-score=0.665 to 1fnnA SCOP code=a.4.5.11	TM-score=0.687 to 2fnaA SCOP code=a.4.5.11	TM-score=0.497 to 1lbuA SCOP code=a.20.1.1