Template-based Modeling Results for GSIB_ECOLI

Submitted Primary Sequence

>Length 512
MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHCCHHHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCEEECCCCCEEECEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ
42311120000000000000010122221000002121321012202222011002100210010153120211003102013211000020141030121230101001000210122232131111132022021113210201022111000100011100100320033123301221101000001102341101022031113322130110001001222000010221201001201231023035234020011111000000000334213121001001100112000200020101002000021010032142131002101300340113310101000022121022002001310240202010100100200110223233311010000000010110010000000033133221110211031001002202522222201400310020013200000000020000014303101001220100220222
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ
1	MUSTER	1uqwA	0.945	0.932	3.796	threading_1	-------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKE-KLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAI-SPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAA--QTGEAQFAFPIPYEQATLLEKNKNIEL---ASPSIQRYISNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTADAGQRAAEVE-GKGQKESG-VRFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIPDTG-FSFEDADLQ
2	SPARKS	3t66a	0.246	0.904	5.792	threading_2	--------------------------EKHIHFLFNVSTNSLDPHVDMT--YIPVRAGITETLVRVDENVTIAPWLAESWD-STDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESVAIENAL---KIDEIEA-DGYTLHITTKEPFPEFISELVNPNVSIIDVTE-----EDFTNHPVGTGPFALESFTPGSKLELVRYDEYWD-GASKLDSVTFSFNEDASARSLALESGQADIVYRPEVESIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTIMLGYAEVADGPFIPTLPFAPSYEKKETGTDIAIQYLEEAGYTLELHFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMA-----SNRDWDLITYSNVTSPRGDAGYYLNATYHPTG----ALNFSSVNDPELTGIIDELNRTVDQDVRAKLTEQAAAYIDEQKIHSFLIHPSAVVAYDENVKNWVTTRSEYYMITQLDV-
3	PROSPECT2	3m8uA	0.282	0.934	5.801	threading_3	--------------------------DKTFINCVSRSPTGFSPALVMDGISYNASQQVYNRLVEFKRGTDIEPALAESWTVSDDGLTYTFNLRKGVKFHSNKEFNADDVVFSFQRQLDPNHPYHNVSFSTLLKSVEKVDMHTVKITLNRQDATFLASLGMDFISIYSAEYADKKPETIDTTPIGTGPFLFAGYQVDQKSRYLAHKEYWK-GKADIDRLIFEIVPDATARYAKLQAGACDLIDFPNAADLEKMKTDPKVNLHSQSGLNIAYIAFNTEKAPFDNVKVRQALNYAVDKNAIIDAVYRGAGVAAKNPLPPTWGYNNEITGYEYSPEKAKQLLKEAGFENGFETDIWVQPVVPNPRRMAELVQSDWEKVGVKSKLVSYEWGDYIKRTK-----AGELTAGTYGWSGDNGDPDNFLSPLFGSENVGNS--NYARFKNPELDALLHKAVGLSDKAERAKIYEQAQVLLKEQAPWINVAHSINFAPTSKRVQDYKQSPFGYTYLYGTKLD
4	PPA-I	1uqwA	0.910	0.934	5.031	threading_4	-------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKE-KLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAISPAALEKY-GKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAL-QTGEAQFAFPIPYEQATLLEKNKNIELASPSIQ---RYISNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTADAGQRAAEVEGKGQKESGV--RFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIPDTG-FSFEDADLQ
5	HHPRED-l	1uqw_A	0.998	0.932	3.814	threading_5	-------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKE-KLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATA-ISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAA-LQTGEAQFAFPIPYEQATLLEKNKNIEL-ASPSI-QRYIS-NVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTA-DAGQRAAEVEGKGQKESGVR-FYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWI-PDTGFSFEDADL-
6	HHPRED-g	1dpe_A	0.272	0.934	3.113	threading_6	---------------------------KTLVYCSEGSPEGFNPQLFISGTTYASSVPLYNRLVEFKGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKELNADDVVFSFDRQKNAQNPYHKMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWG-TKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWARPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAK-----DGEHQTVMMGWTGDNGDPDNFFATEFSCAASE-QGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE
7	SP3	3t66a	0.246	0.904	6.033	threading_7	--------------------------EKHIHFLFNVSTNSLDPHVDMT--YIPVRAGITETLVRVDENVTIAPWLAESWD-STDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESVAIENAL---KIDEIEA-DGYTLHITTKEPFPEFISELVNPNVSIIDVTE-----EDFTNHPVGTGPFALESFTPGSKLELVRYDEYWD-GASKLDSVTFSFNEDASARSLALESGQADIVYRPEVESIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTIMLGYAEVADGPFIPTLPFAPSYEKKETGTDIAIQYLEEAGYTLELHFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMA-----SNRDWDLITYSNVTSPRGDAGYYLNATYHPTG----ALNFSSVNDPELTGIIDELNRTVDQDVRAKLTEQAAAYIDEQKIHSFLIHPSAVVAYDENVKNWVTTRSEYYMITQLDV-
8	SAM-T99	1dppA	0.272	0.934	4.583	threading_8	---------------------------KTLVYCSEGSPEGFNPQLFTSGTTYDASVPLYNRLVEFKIGTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDTRELNADDVVFSFDRQKNAQNPYHKMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWG-TKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRA-----KDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGS-NYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE
9	MUSTER	3m8uA	0.280	0.934	3.641	threading_9	--------------------------DKTFINCVSRSPTGFSPALVMDGISYNASQQVYNRLVEFKRSTDIEPALAESWTVSDDGLTYTFNLRKGVKFHSNKEFNADDVVFSFQRQLDPNHPYHNVKFSTLLKSVEKVDMHTVKITLNRQDATFLASLGMDFISIYSAEYADKMLAAGKTTPIGTGPFLFAGYQVDQKSRYLAHKEYWK-GKADIDRLIFEIVPDATARYAKLQAGACDLIDFPNAADLEKMKTDPKVNLHSQSGLNIAYIAFNTEKAPFDNVKVRQALNYAVDKNAIIDAVYRGAGVAAKNPLPPTWGYNNEITGYEYSPEKAKQLLKEAGFENGFETDIWVQPSNPNPRRMAELVQSDWEKVGVKSKLVSYEWGDYIKRTK-----AGELTAGTYGWSGDNGDPDNFLSPLFGSENV--GNSNYARFKNPELDALLHKAVGLSDKAERAKIYEQAQVLLKEQAPWINVAHSINFAPTSKRVQDYKQSPFGYTYLYGTKLA
10	SPARKS	3rqta	0.219	0.891	5.577	threading_10	--------------------------GKDLNISLPLKTKSIAPYETD----VPVKIGAAESLFKTNDQGKIEKALVKSYHQPND-TTLDIELKDNIKFQNGQKLTAEKVKSSLENSKKSD----LVKYSLPISSITA-KGQKLTIKTNSAYPELVSELANPFAIYDTDA-----KSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQ-GKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLYNHTNK---KTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQA-KLLAKDGYTKEHKIKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGY------LKDRSAWDATYSFGTIPRGDTGYFFNQAYKKDG----AINKGDYNNSNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIYRTTIE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.964 to 1uqwA TM-score=0.997 to native SCOP code=c.94.1.1	TM-score=0.964 to 1uqwA TM-score=0.997 to native SCOP code=c.94.1.1	TM-score=0.850 to 1uqwA TM-score=0.877 to native SCOP code=c.94.1.1	TM-score=0.901 to 1dppA TM-score=0.845 to native SCOP code=c.94.1.1	TM-score=0.964 to 1uqwA TM-score=0.997 to native SCOP code=c.94.1.1

Experimental Structure

Download 1uqwA

SCOP code=c.94.1.1