Template-based Modeling Results for GSIA_ECOLI

Submitted Primary Sequence

>Length 623
MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR
CCCCCCCCCCCEEEEECCEEEEECCCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR
44433324221001021010102234321100220001024110000002121110000100130033210102122000223233223013232210130222100000120111011101002100100311331233201210230023040220320124011101200000000000010301000011001110010011003003200532400000000000000200210000220100120212101311222102000300132222322322331222223322332222333222323100202201010213311133223202002500020231100000021211101001000301313201000211303312222022023300000111211112211001001200310221213201210120033020113102211210120111000000001130200001100010010011100300220053130000000000000220021000012010012022310132122210220030012132333423321223302120323033122110110121000012313211235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR
1	MUSTER	3bk7A	0.226	0.823	2.618	threading_1	LPEQLD---------EDCVHRY----GVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDN-------DSWDNVIRAFRGNQNYFERLKNGEIRPVVKPQYVDLLPKAVKG-KVRELLKKVDEVG------KFEEVVKELELENV---LDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANE--KAVLVVEHDLAVLDYLSDVIHVVY-GEPGVYG----IFSKPKG--TRNGINEFLQGYLKDENVRFRPYEI--------RFTKLSERVDVERETLVEYPRLVKDY----GSF--------KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDL------------------TVAYKPQYIKAEYEGTVYELLSKI-----DSSKLNSNFYKTELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFE-GEPGRHGRALPPM--GMREGMNRFLASVGIRDPDSGRPRANKEGSVKDREQKARGEYYYA------------------------
2	SPARKS	1yqta	0.204	0.803	5.135	threading_2	--------------EEDCVHRYGVN-----AFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLC---GDNDSWDGRAFRGNEL----QNYFEKLKNGEIRPVVKPQYVDLIPKAVKGK-------VIELLKKADETGKLEEVVKALELEN---VLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEE-GKSVLVVEHDLAVLDYLSDIIHVVYGE-----PGVYGIFSQPKG--TRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIER--------ETLVTYPRLVKDYGS------------FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT------------------VAYKPQYIKADYEGTVYELLSKID-----ASKLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKN-EKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRAEGNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA--------------------------------
3	PROSPECT2	3ozxA	0.187	0.807	3.877	threading_3	----------------EGEVIHRYKVN---GFKLFGLPTKNNTILGVLGKNGVGKTTVLKILAGEIIPNF---------------GDPNSKVGKDEVLKRFRGKEIYNYFKELYSNLKIVHKIQYVEYAVNEILTKIDERGKKDEVKELLNMTNLWNK------DANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLK--NKYVIVVDHDLIVLDYLTDLIHIIY-GESSVYGRVSKSY-AARVGINNFLKGYLPAENM--------------------KIRPDEIKFMLKLKTKMKWTKIIKKLGD------------FQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQIL-----------SYKPQRIFPNYDGTVQQY--LENASKDALSTSS--------WFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFK-GEPEKAGTSPVTLKTGMNEFLRELEVTFRRDAETGR--------------PRVNKIGSYLDRVQKERGDYYSMVLST-------
4	PPA-I	3bk7A	0.211	0.828	5.588	threading_4	LPEQLDED-----------CVHRYGVNA--FVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNL-----CEDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQYVDLLPKAVKG-KVRELLKKVDEVG------KFEEVVKELELENV---LDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEG-KAVLVVEHDLAVLDYLSDVIHVVYGE-----PGVYGIFSKPKG--TRNGINEFLQGYLKDENVRFRPYEIR--------FTKLSERVDVERETLVEYPRLVKDYGSF------------KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT------------------VAYKPQYIKAEYEGTVYELLSKI-----DSSKLNSNFYKTELLKPLGIID-LYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFE-GEPGRHGRA--LPPMGMREGMNRFLASVGITDPDSGRPRANKEGSVKDREQKARGEYYYA------------------------
5	HHPRED-l	1yqt_A	0.217	0.793	2.256	threading_5	-------------E-EDCVHRYGVNA---FVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLGNDSWDGVIRAFRGNE-------LQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKV-IELLKKA------DETGKLEEVVKALELEN---VLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSE-EGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVQPKGTRNGI----NEFLRGYLKDENV----------------RFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGS------------FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT----------------VAYKPQYI--KADYEGTVYELLSKI-DA----SKLNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKNEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---RE----G-NRF-LASIGITDPDTGRPRAN-KEGSVKD-----------REQKEKGEYYYIA-----------
6	HHPRED-g	1yqt_A	0.229	0.791	1.931	threading_6	------------------------EEDCVHRYGVNAFVLKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLC---GDNDSWDGV---IRAFRGNLQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVI-ELLKKA------DETGKLEEVVKALELEN---VLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEE-GKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYG-----IFSQPK--GTRNGINEFLR-GYLKD--ENVRFRPY-----EIKFTKTGERVEIERETLVTYPRLVKDYG------------SFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT------------------VAYKPQYIKADYEGTVYELLSK-IDA----SKLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKNEKTALVVEHDVL-IDYVSDRL-VFE-GEPGKYLPP---RE----G-NRFL-ASIFRRDPDTGRP-RANKEGSVKDRE-----QKEKGEY------YYIA-----------
7	SP3	1yqta	0.200	0.801	5.573	threading_7	--------------EEDCVHRYGVN-----AFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLC---GDNDSWDGRAFRGNEL----QNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIELLKKA-------DETGKLEEVVKALELEN---VLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEE-GKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDEN----VRFRPYEIKFTKT------------GERVEIERETLVTYPRLVKDYGS------------FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDL------------------TVAYKPQYIKADYEGTVYELLSKID-----ASKLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKN-EKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRAEGNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA--------------------------------
8	SAM-T99	3dhwC	0.323	0.477	2.915	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIKLSNITKVF-------HQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQ--HFNLLSSRTVFGNVALPLELDNT-PKDEVKRRVTELLSLVGLGDKHDS-YPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNII---
9	MUSTER	3ozxA	0.196	0.804	2.447	threading_9	----------------EGEVIHRYKVN---GFKLFGLPTKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDP---------------NSKVGKDEVLKRFRGKEIYNYFKELYSNLKIVHKIQYV-GTVNEILTKIDERGKKDEVKELLNMTNLWN------KDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLK--NKYVIVVDHDLIVLDYLTDLIHIIY-GESSVYGRVSKSYA-ARVGINNFLKGYLP--------------------AENMKIRPDEIKFMLKLKTKMKWTK-----------IIKKLGDFQLVV-DNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQIL-----------SYKPQRIFPNYDGTVQQY--LENASKDALSTSS--------WFFEEVTKRLNLH-RLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFK-GEPEKAGLATSPLKTGMNEFLRELEVTFRR-DAETGRPRVNKIGSYLDRVQKERGDY-----SMVLST----------------
10	SPARKS	3g5ua	0.250	0.811	3.919	threading_10	NKPSIDSFSKSGLEFKNIHFSYPSRKEV-QILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPL-----DGMVSIDGQ-----DIRTINVRYLREI----IGVVSQEPVTT----------IAENIRYREDVT----MDEIEKAVKEANA---YDFIMKLPHQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKARE--GRTTIVIAHRLSTVRN-ADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQTLDEDVPPASFWRGVFTNGGPPEPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSI--------PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLN---VQWLRAQLGIVSQEPFDC-----SIAENIA-----YGDNSRVVSYEEIVRAAKEANIH-QFIDSLPDQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE--GRTCIVIAHRLSTIQN-ADLIVVIQNGKVKEHGTHQQLLA--QKGIYFSMVSVQA-------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.558 to 1ji0A SCOP code=c.37.1.12	TM-score=0.565 to 1sgwA SCOP code=c.37.1.12	TM-score=0.533 to 1ji0A SCOP code=c.37.1.12	TM-score=0.553 to 1sgwA SCOP code=c.37.1.12	TM-score=0.553 to 1ji0A SCOP code=c.37.1.12