Template-based Modeling Results for GPH_ECOLI

Submitted Primary Sequence

>Length 252
MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCEEECCHHHHHHHHCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND
555233010000001000000020001001100321413202232002101200210022003213333211221113232333222331022003101300131123202013201100110243201000001312210110032020230000000033133331212001100430202230000001031002002102010000010122031023031100021031003001123233432447
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND
1	MUSTER	2hszA	0.455	0.881	2.624	threading_1	---GTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS-ENLVTWIGNGADVLSQRAVDWACKQAE-------------KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEL-GGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKITQ------------
2	SPARKS	3sd7a	0.234	0.849	3.338	threading_2	---KKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIK-EDLENLDQFIGPPLHDTFKEYYK----------------------FEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL------------
3	PROSPECT2	3sd7A	0.234	0.849	3.481	threading_3	K---KNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKE-DLENLDQFIGPPLHDTFKEYYK----------------------FEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL------------
4	PPA-I	2hszA	0.455	0.881	2.847	threading_4	---GTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS-ENLVTWIGNGADVLSQRAVDWACKQAE-------------KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEL-GGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKITQ------------
5	HHPRED-l	1swv_A	0.173	0.917	2.084	threading_5	-----KIEAVIFAWAGTTVDYGCAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRALTEMPRIASEW-------NRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKDFLVTPDDVPAGRPYPWMCYKNAMELGVYPNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSERNRFVENGAHFTIETMQELESVMEHIEK--------
6	HHPRED-g	2hsz_A	0.462	0.877	1.826	threading_6	----TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLV-TWIGNGADVLSQRAVDWACK-------------QAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE-LGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKITQ------------
7	SP3	3sd7a	0.234	0.849	3.525	threading_7	---KKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKE-DLENLDQFIGPPLHDTFKEYYKF----------------------EDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL------------
8	SAM-T99	2hszA	0.452	0.877	3.981	threading_8	---GTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLP-QASENLVTWIGNGADVLSQRAVDWACKQA-------------EKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE-LGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT-------------
9	MUSTER	2hi0A	0.249	0.925	2.522	threading_9	----GKYKAAIFD-DGTILDTSADLTSALNYAFEQTGHHDFTVEDIKNFFGSGVVVAVTRALAYEGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILD-LKNLRQKGVKLAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAPD-TSECVKVLGVPRDKCVYIGDSEIDIQTARNSED-EIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILGE----------
10	SPARKS	3mc1a	0.250	0.841	3.304	threading_10	----SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFEYY-----------------------NFDEETATVAIDYYRDYFKAKG-FENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDG-KLSTKEDVIRYAESLNIKSDD-AIIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL----------

Predicted Tertiary Structure


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TM-score=0.938 to 2hszA SCOP code=c.108.1.6	TM-score=0.822 to 2ah5A SCOP code=c.108.1.6	TM-score=0.802 to 2hszA SCOP code=c.108.1.6	TM-score=0.809 to 2ah5A SCOP code=c.108.1.6	TM-score=0.938 to 2hszA SCOP code=c.108.1.6