Template-based Modeling Results for GNTX_ECOLI

Submitted Primary Sequence

>Length 227
MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL
CEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHEEEEECCCCCHHHCCHHHHHHHHHCCEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL
20110110110322122132000210032032342101201221242322012013422312200000001210110021022143231010002000100110232221321110000111323213211220110020002112031121001212322323212231122123200102321413200000000000100110020014221210100000123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL
1	MUSTER	1oreA	0.221	0.678	0.713	threading_1	-------------------------------------------ADSELQLVEQRIRSFPDFPT---VFRD---ISPVLKD------PASFRAAIGLLARHLKATHGGR----IDYIAGLDS-------RGF----LFGPSLAQELGLGC---VLIRKRGKLPGPTLWASYSLEYGKAELEIQKDAPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELT
2	SPARKS	1ecfa	0.137	0.934	1.745	threading_2	VAMIIGHGMV----AFRDPNGIRPLVLGKRDIDENRTSVALDTLGFDDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIP-----------ETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANREFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEI
3	PROSPECT2	1g2qa	0.204	0.626	1.288	threading_3	M-----------------------------------------------------------------------PIASYAQELKFPSEGILPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESR-----------GFLFGPTLALALGVGF---VPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELL
4	PPA-I	1ufrA	0.172	0.537	0.758	threading_4	-------------------------------------------------------------------------------RFKAELNAPERRALYRIAHEIVEANK-----GTEGLALVGIHT------RGIPLAHRIARFIAEFEGKEVPVGVLDITLPQV---------------RETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGPRRIYLAVLVDRG
5	HHPRED-l	1wd5_A	0.194	0.546	2.130	threading_5	---------------------------------------------------------------------------------RFRDRRHAGALLAEALA----PL-----GLEAPVVLGLP-------R----GGVVVADEVARRLGGELDVVLVRKVGASYLEREAARLRKRAERYRRVRPKAARKGRDVVLVDDGVATGAS-EAALSVVFQEGPRRVVVAVPVAS-
6	HHPRED-g	1wd5_A	0.187	0.542	2.293	threading_6	---------------------------------------------------------------------------------RFRDRRHAGALLAEALAPL---------GLEAPVVLGLP-----------RGGVVVADEVARRLGGELDVVLVRKVGASYLEREAAVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGAS-EAALSVVFQEGPRRVVVAVP--VA
7	SP3	1ecfa	0.126	0.947	1.373	threading_7	VAMIIGHGMVAFR-DPNGIRPLVLGKRDIDENRTEYMSVALDTLGFDDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIP-----------ETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNNRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEI
8	SAM-T99	1ecgB	0.163	0.705	1.887	threading_8	GQLFTRQCA---------DNPVSNPCLFEYVYF----------------------ARPDSFIDKISV---------------YSARVNMGTKLGEKIAREW-------EDLDIDVVIPIP-----------ETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA---
9	MUSTER	3qwvA1	0.115	0.916	0.707	threading_9	RFCSAGKGLRALRPFHVGDLLFSCPCVLTVGERGHHCECCFAR-KEGLSKCGRC--KQAFYCDVECQKEDWPLHKLECSSMVVLGENWNPSETVRLTARILAKQKIHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFY--------SKYLEFPDHSSLVVLFAQVNNGFTIEDE-ELSHLGSAI--FPDVALMNHS-----CPNVIVTYKLAEVRAV
10	SPARKS	1gph1	0.156	0.934	1.723	threading_10	LIMTETEMIVALDPNGLRPLSIGMMGDAYVVASETCADVVGATYLREVEP-GEMLIIND---EGMKSERFSMNINRSICSMEYRPDSNIDGINVHSARKNLGKMLAQESAVEADVVTGVP-----------DSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPI

Predicted Tertiary Structure


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TM-score=0.742 to 1oreA SCOP code=c.61.1.1	TM-score=0.708 to 1vchD SCOP code=c.61.1.1	TM-score=0.605 to 1ecgB SCOP code=c.61.1.1	TM-score=0.668 to 1g2qA SCOP code=c.61.1.1	TM-score=0.611 to 1ufrA SCOP code=c.61.1.1