Template-based Modeling Results for SYGB_ECOLI

Submitted Primary Sequence

>Length 689
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
CCCCCEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCEECCCEECCCCCCCCCCEEECCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
54432000200133012300320031002101210231202222010000010000002402423332212221111210112313113001000320212232021122241100002022323203200120021003403013112111120200000100010023200101011021321021121103120202102100300342020001132012102210220045120202223200210010031000000202330020122001200321221000126413001100000123142131012102300221010011102212333033003202201113301213210210110001004202120210110010010100120022023000100110033222232001001310112222331222110000000110010000000122141340111001000000100032303020220022003112331212200210021011001210342202120020001232220010111020012132232012001002100200242332223412221132231120121022013202311331303200210030130012002301011313301210020022012001200112213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ
1	SPARKS	1f7ua	0.137	0.803	1.757	threading_1	ASTANMISQLKKLSIAEPAVAKIVDLMRNYISQELSK--------------------ISGVDSSLIFPALEW--TNIPRLRIKGANPKDLAVQWAEKFPCG-DFLEKVEANGP-FIQFFF-----NPQFLAKLVIPDILTRKE-----DYGSCK------------LVENKKVIIEFSSPNAKPFHAGHEKLGWEVIRMNQFGLLAVGFERYGNLVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFK----RMEDGDEEALKIWKRFREFSIEKYID---TYARLN--------IKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKY---------------HFDKMIYVIA-------------SQQDLHAAQFFEILKQ------MGFEWAKDLQHVNFGMVQGMST--------------------------------RKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEH----PEEVADLVGI-SAVMIQDMQGKRINNYEFWERMLS----FEGDTGPYLQYAHSRLRSVERNASGITQEKADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLTPVE
2	PROSPECT2	1qgra	0.077	0.959	2.158	threading_2	MELITILEKTVSPD--RLELEAAQKFLERAAVENLPTF---------------LVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARRELHTLGTE------TYRPSSASQCVAGIACAEIPVNQWPELIPTNPNSTEHMKEIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERRVAALQNLVKIMSLYYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYANDDDDDWNPCKAAGVCLMLLATCCEDDIPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINFSSLAEAAYEAADVADELIVQKLLETTDRPDGHQNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGMAVSTLVEVLGGEFLKYMEANYAEYQVCLAAVGGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMV--DYLNELRESCLEAYTGIVQGLKGDQVMLVQPRVEFILSFIDHIAGDE---DHTDGVVACAAGLIGDLCDVLKLVEARPMIA
3	HHPRED-l	1f7u_A	0.149	0.749	1.879	threading_3	-ASTSQLKKLSIAEPASHPDVNIVDLMRNYISQELSKIGVDSSALEWTNTMER------------GDLLIPI--PRLRI---KGANPKDLAVQWAEKFPCG-DFLEKVEANGP-FIQFFFN--PQFLKLVIPDILTR---KEDY------GSCKL------------VENKKVIIEF---SSPNIA--------KPFHAGH-------------------LRSTIIGGFLANLYEKLGWEVIRMNGLLA--VGFERYGN------EEALVKDPIHHLFDVVRINKDI----EEEGDSI----------PLEQSGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYANIKYDVYGESVKESMLKAID---LFKE-KGLDYLTRDVGAAMYHFDKMIYVIASAAQFFEIL-----KQMGFEWA------KDLQH----------------------------VNFGMVQ-GMS----------------TRKGTVVFLDNILEETKEK-------------MHEVMKKNENKYA-QIEHPEEVADLVMQGKRINNYEFK--WERMLSF-EGDTGPYLQYAHSRLRSVERNASGITWINADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLLGL-
4	HHPRED-g	2o08_A	0.155	0.234	1.422	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRGKALQLVKPHLTE----HRYQHTIGV-ETAIDLAKLYGADQQKAELAAIFHDYAKFDILFYGDELLHAPCGAYYVREVGIDEDVLQAIRFHTT----G-RPN-SLLEKIIFLADYIEPNR--------------QF----PGVEKVRTQAKTDLNGAIISSLVNTITFLLKQPIYPDTL---------ATYNQLLEQ------------------------------------------------------------------------------------------------------------------------------------------------------
5	SPARKS	2zuea	0.144	0.826	1.412	threading_5	-------------------LMEIRESVKERIEEIIKEIAPQWEG------------EIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKKLNLPEGIKDVKAVNG-YINVFI-----DYPHFARILINDILAKGDFGSSEIGKGKKVIVEDVMARILRFLGYEVEVQNYIGIQFAQVYWGYLRLKEE------FERIMNELRERGLKDNPIDHALGLLYVEVNRRLED-------NPELENEIRDIMKK----LESGELYGRKLAEEVVRAQMVTTYKL-------GVKYDLLVW-------ESDIVRRKLFEIALELLSKNENFYIPSDGKYRGAFVMDLRKLVLRRSDGTA---TYTGKDIAYHLWKFGKIDVDL---------------LYKE-----------------WDSTTWT-----TAPDGKSMPNKFGNANIVINVAEQKHPQLAIKYALQL-LG-FEDAAANLYHLAYEHVERPEGVGFTVDEVIQEAVKRARELIEEKNP-----ALSDEEKAEVAEKVGI-GAIRYNLIKYSPDKKIIFR--WEDVLNF-EGESAPYIQYAHARCSSILRKAEEEGIKNADFTKL-SERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVREARLLLVMAVEQVLKNALYLMGIE
6	PROSPECT2	2bkuB	0.074	0.922	2.063	threading_6	MSTAEFALENSILSPDQNIRLTSETQLKKLSNDNFLQDENTKLEGRILA-----ALTLKNELVSKDSVKTQQFAQRWITQVSPEVSIEPRADIELPHGAWPMKIMVDNTGAE----------QPENVKRASLLALGYMCE--------SADALVSSSNNILIAIVQGAQST---------------------ETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQ------AEDIEVQAAAFGCLCKIMSKYYTFMKPYMSPNDKVASMTVEELAQFPQSPLQSYNFALSSILLTRQNEDPSMSAGACLQLFAQNCGNHIEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPLPGVVQACLIGLQDHPKVATNCSWEQLAEATPSPNRIDNEFNARASAFSALDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAPSSVEPVADMLMGLFFRLLEKKDSAFKGFEKYLETFSPYLLKALNQVDSPVGFIADISNSLEEDFRRYSDAMNVLAQMISNPNGADFIPYLNDIMALCVAAQNTKPENGTLEAL--DYQIKVLEAVLDAYVGIVAGL-HDKPEALFPYVGTIFQFIAQVAEDPQLY-SEDATSRAAVGLIGDIAAMIKQFYGQDWVI
7	HHPRED-l	2zue_A	0.145	0.740	1.757	threading_7	-------------------LMEIRESVKERIEEIIKEIAPQ--W-----EG-EIELKET-PDPKLGDFG----TPAFKLAKLLKRPPIEIAEKIVEKLKLNPEGIKDVKAVN-GYINVFI--DYPFARILINDILAKG---DRFGSSE-IGKGIVEHTSVARRILRFLGYEVEVQNYIDIQFAQVYWGYLRLKEE-FERNPIDHALG-----------------LLYVEVNRRLEDNP---EL-ENEIRDIMKKLES-----G--E----LYGRKLAEEVVRAQMVTTYKLGVK---YDLLVW-------ESDIVRRKLFEIALELLSKNENFYKYRGAFVLRKLFPDNPILVLRRSDGTATY--------------------T--------------------------------------GKDIAYHLWKLYKPNKFGNIVQKHPQLAIKYALQLLGFELYHLAYEHVE-RP-----------E-GKFSGRKGVGFTVDEVIQEAV---------------------KRARELIEEKNVGIGAIRYLIKYSPDKKIIFR--WEDVLNFEG-ESAPYIQYAHARCSSILRKAEEEGIKNADF-TKLSERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVREARLLLVMAVEQVLKNALYLMGI-
8	HHPRED-g	2ogi_A	0.153	0.247	1.372	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKDYT-GLD----RTELLSKVRH--S----DKRFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAKEDEFLKKNNIWHGLVGIYKIQELAIDQDILAAIAKHTV----G-SAQ-STLDKIVYVADYIEHNRD--------------F----PGVEEARELAKVDLNKAVAYETARTVAFLASAQPIYPKTIETYNAYIP-----YLD-------------------------------------------------------------------------------------------------------------------------------------------------------
9	SPARKS	1iq0a	0.168	0.727	1.326	threading_9	---------------------MLRRALEEAIAQALKEMGVP------------------------VRLKVAR--APK----DKPGDYGVPLFALAKELRKP-----------------------------PQAIAQELKDRLPLP------------------------EFVEEAVPVG---------------GYLNFRRTEALLREALRPKVVLVEHHLRNIALGDAIARILAYAGREVLV-------LNYIDDT-------------GRQAAETLFALRHYG-----LTWDGK-------------EKYDHFAGRAYVRLH---QDPEY---ERLQPAIEEVLHALER-------GELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALLEQS----PHVFRPREGKYKDIAFQFWRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVVDVRQ-----SHPQALVRAALALAGYPALAE---KAHHLAYETVLLEGRQMSGAVSVDEVLEEATRRARAIVEEKNPDEEAARMVALTEPKKQIDFR--YQEALSF-EGDTGPYVQYAHARAHSILRKAGEWGAPDLS---QATPYERALALDLLDFEEAVLEAAEERTPHVLAQYLLDLAASWNAYYNAREVLTAPEGLRELRLSLVQSLQRTLATGLDIPAPE
10	PROSPECT2	1b3ua	0.099	0.781	1.964	threading_10	AAADGVLIDELRNEDVQLRLNSILSTIALALGVERTRSEL------------------------------------LPFLTDTIYDEDEVLLALAEQLGTFTTLV--------------------GGPEYVHCLLPPLESLA--------TVEETVVRDKAVESLRAISHE---------------------HSPSDLEAHFVPLVKRLAGG-----DWFTSRTSACGLFSVCYP------RVSSAVKAELRQYF-----------RNLCSDDTPMVRRAAASKL--------------------------GEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEA-----CVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITK-TDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV----------SDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLIRQLSQSLLPAIVELAEDAKVRLAIIEYMLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLKYFAQEA--LTVLS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.470 to 1hurA SCOP code=c.37.1.8	TM-score=0.743 to 1f7uA SCOP code=a.27.1.1	TM-score=0.716 to 1qgkA SCOP code=a.118.1.1	TM-score=0.708 to 1f7uA SCOP code=a.27.1.1	TM-score=0.393 to 2pq7A SCOP code=a.211.1.1