Template-based Modeling Results for SYGA_ECOLI

Submitted Primary Sequence

>Length 303
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCEEEEEEEHHHEECCEECCCCEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
554242321200000012002521000021011220101100100021012210200102112212213114112101201101000211233002000100330111122230100223131111002010010001002001000111013020310101011001000000220300010211311212010000012211110211032010310120022013102201203230100001100100000100113400112212300010120031004001201331212214448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK
1	MUSTER	1j5wB	0.603	0.898	3.797	threading_1	--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGIK--EHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQAARKAARVFLEVQA------------
2	SPARKS	1j5wa	0.581	0.891	8.927	threading_2	--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERI-AYLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
3	PROSPECT2	3rf1A	0.637	0.937	4.590	threading_3	NLYFQSNATFSQILNLQNYWQEQGCAI-QPYD-PAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDG-EVTQFTYFQQVGGIAVDLVSAEITYGLERIA-YLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNIL--EQGLALPAYDYCL-AAHTFNLLDARGAISVAQRQDYL-KIRELSKNCAEIYKKNL-----------N
4	PPA-I	1j5wB	0.603	0.898	8.639	threading_4	--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGIK--EHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQAARKAARVFLEVQA------------
5	HHPRED-l	1j5w_A	0.596	0.891	5.281	threading_5	-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
6	HHPRED-g	1j5w_A	0.596	0.891	5.133	threading_6	-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQAN----------
7	SP3	1j5wa	0.581	0.891	8.579	threading_7	--------YLQDVIKLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPT-----ENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERI-AYLQGVDNVYEVQWNEN----VKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVE--KNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQ-AARKAARVFLEVQAN----------
8	SAM-T99	1j5wB	0.610	0.898	7.280	threading_8	-------YLQDVI-KLNDFWASKGCLLEQPYD-EVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGI--KEHDIRFVEDNWESPTLGAWGVGWEVWLDG-EITQFTYFQQIGGISLKDIPLEITYGLERIA-YLQGVDNVYEVQWNE----NVKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLV--EKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA-ARKAARVFLEVQA-----------
9	MUSTER	3rf1A	0.615	0.934	3.645	threading_9	LYFQSNATFS-QILNLQNYWQEQGCAI-QPYD-PAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDG-EVTQFTYFQQVGGIAVDLVSAEITYGLERIA-YLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNILE--QGLAL-PAYDYCLAAHTFNLLDARGAIS-VAQRQDYLKIRELSKNCAEIYKKNLN-----------
10	SPARKS	2ztga	0.182	0.944	1.069	threading_10	NPVFKKPFELDEREYYLNFFERRGHGRIERYPVVTIASDFQPFVTSGVAPPPANPLTISQPCIRLDDGRYPGKEI----YWK---------NETVAYCTELLNELGVKKE--DIVYKEEPWAGG--GNAGPCLEAIVGGLEVATLVFNLEIKGARYRDNYIVDTYGLERFVWASKGTPTVYDAIFPEIDNSNVSFNERVRRIVAESSKLGIGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCIFLGDGLVPSNAGAGYLARIRRSLRLAEELLYDLVEHKKGFEFDVPL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.946 to 1j5wB SCOP code=d.104.1.1	TM-score=0.928 to 1j5wB SCOP code=d.104.1.1	TM-score=0.923 to 1j5wB SCOP code=d.104.1.1	TM-score=0.924 to 1j5wB SCOP code=d.104.1.1	TM-score=0.946 to 1j5wB SCOP code=d.104.1.1