Template-based Modeling Results for PTXC_ECOLI

Submitted Primary Sequence

>Length 368
MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLID
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCHHHHHHCCCHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLID
33310130020000000000000000001211212100120112212000200200220010003100000000000000332302000000000000010020101111211112111211011100110113211000000000000000002201322012000003021100000000010011112201230220021012003300110000000011000000000000000001100020011100021022111113112110230001110002000000000000100233112300000000000001010211110000000000000000000000000100001000111126
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLID
1	PROSPECT2	3a0oA3	0.085	0.899	1.653	threading_1	NSEQLSAFADAVAKDPNHCGWAEFYEKSV-----EPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWL--LAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPHYWMTGMAYLIEAANLIRSYIGYDLY--------QRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGH---------YQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHD-------------YPQVEAV
2	PPA-I	3g61A1	0.076	0.826	1.031	threading_2	-------------------------------------------------VSVLTMFAGWLDRLYMLVGTLAAIIHGVALP----LMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDLNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAF-------ANARGAAYEVFKIIDNKPS----IDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYVTQQLMT
3	HHPRED-l	3qnq_A	0.178	0.902	2.916	threading_3	VMRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPG-YS--------EFMASLNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATP-----FQVAYIMPGTKESILGVIPAALMG----SQGLFVAMIIAIISTEIYRFLVQIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFGSIHNVVGKLQEPLSGASLWGAVIAVILVHVLWACGIHGTIVGGVM-------SPIWLLMDQNRIAF-QAGQDVPNTITAQFFDL---WIYMGTLALVVGMLLFARSQQLKSLGR----LSIAPGIFNINEMVTFGMLLLIPFI-VVPVVLTIVSYFAME-WGLVARPSAGKI-
4	HHPRED-g	3qnq_A	0.170	0.897	2.581	threading_4	VMPVAGKVADGLVLTMPFLIIGSIFLIISTLIPGSEFMASL--FG-KNWN---VALGYPVSATFNIMALIAVFGIAYRLGEYYKVDSGALSLVTFLLATP--------F-QVAMPG--TKESI--LVDGVIPAALMSQGLFVAMIIAIISTEIYRFLVQKKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFGSIHNVVGKLQEPLSGASLWGAVIAVILVHVLWACGIHGTIVGGV----------MSPIWLSLMDQNRIAGQDVPNTITAQFFDL---WIYMGTLALVVGMLLFARSQQLKSLGRLSIA----PGIFNINEMVTFGMLLLIPF-IVVPVVLTIVSYFAME-WGLVARPSGAAVT
5	PROSPECT2	1ee4a	0.065	0.921	1.615	threading_5	--QELPQMTQQLNSMQEQLSATVKFRQILSREHRPPIDVVRENQPEMLQLEAAWALTNIASGTSAQTKVVVAVPLFIQLLYTGSVEVKEQAIWALGNVA------------GDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGK-------------KPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIRIPKRLVETLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAI--SNASSGGLQRPDIIRYLVLLEIADNRIIEVTLDALENILKMGEADKEARGLNINE
6	HHPRED-g	1cii_A	0.132	0.247	1.024	threading_6	ISSNLNRFSRGLGYAGKFTSLADWITEFGKAVRT------------ENWRPLFVKTETATALV--ALVFSILTGSALGII----GYGLLMAVTGALIDESLVEKANKFW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	1jdha	0.085	0.924	1.578	threading_7	SPQMVSAIVRTMQNVETARCTAGTLHNLSHHREGPALVKMLGSPVDSVLFYAITTLHNAKMAVRLAGGLAITTDCLQILAYGNQESKGPQALVNIMLLWTTSRVLKVLSV---CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS----------------DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQ----NAVRLHYGLPVVVKLLHP-----PSHWPLIKATVGLIRNLALCPANHAPLREEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYVAAGVLCELAQDKEAAAEGAMS
8	PROSPECT2	1ejlI	0.119	0.938	1.577	threading_8	VNWSVEDIVKGINSLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLPIQFESAWALTEQTKAVVAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR---------DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN------------LCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVGVVPQLVKLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITEQIVYLVHCGIIEPL--MNLLSAKDTKIIQVILDAISNIFQAAEKLGETEECGGLD
9	PROSPECT2	1xm9A	0.089	0.889	1.504	threading_9	AVQYLQQVYQLGGICKVQQAAAGALRNLVFRSTREAVSLLRRTGNAEIQKQLTGLLWNLSEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAERYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR------------------------LLQSGNSDVV----------------RSGASLLSNMSRHPLLHRVMGNQVFP-EVTRLLTSHTGNTSNSEDILSSACYTVRNLMPKAAEAARLLLDMWSSKELQGVL
10	MUSTER	3qnqA	0.165	0.891	0.728	threading_10	VMPVAGKVARHLLAIRDGLVLTMPFLIIGS----FLIISTLPIPGYSFMASLFVALGYPVSATFNIMALIAVFGIAYRLGEYDALASGALSLVTFLLATP--------FQVAYIMPGTKESILVDG---VIPAALMGSGLFVAMIIAIISTEIYRFLVQIKMPEAVT-FA----IPIVVTVVWIIRLIFEHTTF-IHNVVGKLLQEPLSILGLWGAVIAVILVHVLWACGIH----------GATIVGGMSPIWLSLMRIAFQAGQDVPNTITAQFFDL---WIYMGTLALVVGMLLFARSQQLKSLGRL----SIAPGIFNINEMVTFGM--LLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVT

Predicted Tertiary Structure


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TM-score=0.422 to 1h6gA SCOP code=a.24.9.1	TM-score=0.611 to 1j0nA SCOP code=a.102.3.2	TM-score=0.417 to 1sziA SCOP code=a.24.23.1	TM-score=0.394 to 1lv7A SCOP code=c.37.1.20	TM-score=0.395 to 1kyqB SCOP code=c.2.1.11