Template-based Modeling Results for PTXB_ECOLI

Submitted Primary Sequence

>Length 161
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHCCEEEEEEEECCCHHCCHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
44322112100000000000000000010000201020113331322112212132232322223333122000000210101100210300000000202122321233003311010002223000000012022013101300423322332223434
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
1	MUSTER	3bp3A	0.342	0.491	1.987	threading_1	-------------------------------------------------------------------TGTSEAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEDEYIRN--------------
2	SPARKS	1iba_	0.359	0.484	2.321	threading_2	-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
3	PROSPECT2	1iba_	0.372	0.484	1.530	threading_3	M-----------------------------------------------------------------------APALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
4	PPA-I	3bp3A	0.342	0.491	3.544	threading_4	-------------------------------------------------------------------TGTSEAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEDEYIRN--------------
5	HHPRED-l	3bp3_A	0.316	0.491	5.764	threading_5	------------------------------------------------------------------TGTSE-APALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFGTKSDNLKTE-DEYIRN-------------
6	HHPRED-g	3bp3_A	0.354	0.491	5.379	threading_6	------------------------------------------------------------------TGTSE-APALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTE-DEYIRN-------------
7	SP3	1iba_	0.359	0.484	2.408	threading_7	-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
8	SAM-T99	1ibaA	0.359	0.484	4.294	threading_8	-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
9	MUSTER	1ibaA	0.359	0.484	1.884	threading_9	-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
10	SPARKS	3ipja	0.258	0.578	2.240	threading_10	---------------------------------------------------------------SNANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREI-INDKKVEKVEVKGVFFTSGQYQIILGTGVNKVYAEVEKMGLKTLSKKEQDEL---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.490 to 1f9nB SCOP code=a.4.5.3	TM-score=0.491 to 1b4aA SCOP code=a.4.5.3	TM-score=0.729 to 1ibaA SCOP code=d.95.1.1	TM-score=0.673 to 1ibaA SCOP code=d.95.1.1	TM-score=0.491 to 1b4aA SCOP code=a.4.5.3