Template-based Modeling Results for GLTP_ECOLI

Submitted Primary Sequence

>Length 437
MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPVSITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPVSITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPVSITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ
55323121010000000000000000221132121001200210020002001000000000000000010220320030001000001000000000000001002112113122112100121210132132223100000021012110101241310000000000000011122233220010021003001200200020000000000010003110200120020000000000000000000003101100110021012100000010012110120121033120223000000100000001000000000000002002020102100000000000020111010100000000011120112000000001100100100010001000000013124312331022113312242343245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPVSITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ
1	MUSTER	3kbcA	0.352	0.911	3.591	threading_1	-KYIEYPVLQKILIGLILGAIVGLILGHYGYAHA--VHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAV----------GGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
2	SPARKS	1xfha	0.355	0.897	4.934	threading_2	-------VLQKILIGLILGAIVGLILGHYGY--AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVG----------GQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
3	PROSPECT2	1xfhA	0.352	0.897	4.374	threading_3	-------VLQKILIGLILGAIVGLILGHYGY--AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQ----------QFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
4	PPA-I	3kbcA	0.352	0.911	7.863	threading_4	-KYIEYPVLQKILIGLILGAIVGLILGHYGYAHA--VHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG----------QQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSEAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
5	HHPRED-l	2nwl_A	0.357	0.890	13.273	threading_5	-----YPVLIKILIGLILGAIVGLILGHYGY--AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG--Q---QF----------PPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
6	HHPRED-g	2nwl_A	0.358	0.888	11.269	threading_6	-----YPVLIKILIGLILGAIVGLILGHYGYA--HAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAV-GG-QQF-------------PPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYL-MKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
7	SP3	1xfha	0.352	0.897	1.565	threading_7	-------VLQKILIGLILGAIVGLILGHYGY--AHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG----------QQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
8	SAM-T99	3kbcA	0.354	0.911	11.514	threading_8	-KYIEYPVLQKILIGLILGAIVGLILGHYGYAHA--VHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQP----------HQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------
9	MUSTER	3gi9C	0.115	0.895	0.775	threading_9	MELKNKKLSLWEAVSMAVGVMIGASI-----SIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKAIGDN--IITGALSILLWMSYVISIALFAKGFAGYFLPLIAPINTFNIAITEIGIVAFFTALNFFG----SKAVGRA---EFFIVLVK---LLILGLFIFAGL---TIHPSYVIP--DLAPSAVSGMIFASAIFF-LS-YMGFGVITNASEHI-RAIFISILIVMFVYVGVAISAIGNLIDELIKASENALAVAAKPFLGNLGFLL-SAATIYGGANVAYSLAKDGELPEFFERKVWFKST----EGLYITSALGVLFALLFNMEASITSAVFMVIYLFVI----LSHGGRKEIVIFSFIVVLGV-FLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKTFSNNMYVKSLES-----------
10	SPARKS	3hfwa	0.143	0.769	0.727	threading_10	-----MEKYVAAMVLSAAGDALGYYNGKWFLQDGEKIHRQLAQLG---------------------GLDAL-DVGR-WRVS--------DDTVMHLATAEALVEA---GKAPKLTQLYYLLAKHYQDCMEDMDGRAPGSVHNAMQLKPGKPNGWRIPFN------------------SHEGGC-----------------GAAMRAMCIGLR-----FPHHSQLDTLIQVSIESGRMPTGYLGALASALFTAYAVNSRPPLQWGKGLMEL-------------LPEAKKYIVQSGYFVE------ENLQHWSYFQTKWENYLKLRGILDGESFPESFGVKERDQFYTSLSYSGWGGSSGAPMIAYDAVLAAGDSWKELAHRAFFHGG---DSDSTAAIAGCWWGVMVSPSNYEKLYRNRLEETARALLGSKEDTVIS

Predicted Tertiary Structure


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TM-score=0.438 to 2r2vA SCOP code=h.1.3.1	TM-score=0.441 to 1lrzA SCOP code=a.2.7.4	TM-score=0.441 to 2r2vA SCOP code=h.1.3.1	TM-score=0.442 to 2r2vA SCOP code=h.1.3.1	TM-score=0.438 to 2r2vA SCOP code=h.1.3.1