Template-based Modeling Results for GLRK_ECOLI

Submitted Primary Sequence

>Length 475
MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
5542222132011000000000000100101101201220132012112211111320210120012012213100002232003102210430030022001102333112102300210021212322322200220220121022012102200112022022202210311000000000000000100021000002301200220132311222022222210220022022003202302211320122002202000000220010012322232223022002102210210230022001002222422022120102200210021012104324020202142110101120001001000210031023302000201223420001000112301331021002201302332202240000000001100430502020102333300010201225439
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
1	MUSTER	3dgeA	0.252	0.484	1.804	threading_1	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA--
2	SPARKS	2c2aa	0.253	0.491	5.242	threading_2	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN------VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR---
3	PROSPECT2	1y8nA	0.146	0.651	2.921	threading_3	-------PKQIERY-----------------------------------------------------SRFSPSPLS-----------------IKQFLDFGRDNACEKTSYMFLRKELPVR-------------------------------------------------------LANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPED-------------------------PQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPGSIDPTCNVADVVKDAYETAKMLCEQLEVEEFNAKAPIQVVYVPSHLFHMLFELFKNSMRAKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYS---------PLFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALDASK
4	PPA-I	3dgeA	0.252	0.484	2.645	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA--
5	HHPRED-l	2c2a_A	0.249	0.491	4.909	threading_5	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVTE-----SKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNCVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR---
6	HHPRED-g	2c2a_A	0.258	0.491	4.184	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVTESK--------ELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR---
7	SP3	2c2aa	0.254	0.488	4.451	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR---
8	SAM-T99	3dgeA	0.260	0.478	7.212	threading_8	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVVEAYIDPTRIRQVLLNLLNNGVKYSAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK-----
9	MUSTER	3a0rA	0.203	0.684	1.572	threading_9	---------------------------------------------------------------------------------------------FSESILESLEITLSKDGRTEWNKKAEQLFGLKKENVLG-----RRLKDLPD-FEEIGSVAESVFENKEPVFLNFYKFGERYFNIR-------------------FSPFRN--------AKTQLLEGVI-IDDVTELYKYEEER-----KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHL--DDPETLKKYINIITNELSRLETIVKEILEYSKE---RVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF------------TTLGLSICRKIIEDEGGKIWTENR-ENGVVFIFEIPKTPEKR
10	SPARKS	3d36a	0.207	0.457	4.965	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLAA--DKRRQYARIAIEELDRAEAIITDYLTFAKPAPETP---EKLNVKLEIERVIDILRPLANMSCVDIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVLIRIADTGVGMTKEQLERLGEPYF-----TTKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPLAS---

Predicted Tertiary Structure


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TM-score=0.561 to 1ys3B SCOP code=d.122.1.3	TM-score=0.561 to 1ys3B SCOP code=d.122.1.3	TM-score=0.564 to 1ys3B SCOP code=d.122.1.3	TM-score=0.714 to 1y8pA SCOP code=a.29.5.1	TM-score=0.561 to 1ys3B SCOP code=d.122.1.3