Template-based Modeling Results for GLPQ_ECOLI

Submitted Primary Sequence

>Length 358
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEECCCHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
5411110000000000001002122132321000002001120011002001101321020010001003231000000210320011232123222321200011010310120203311323213313212221221323230210320020021013212331100010211223332032002100200331222233221000002130022012212231123020010001232232223323121121112111211002100210100001130013322322312221002102425010000002233103211211210000023010200001102201311454
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
1	MUSTER	1t8qB	0.963	0.894	2.672	threading_1	----------------------------NEKIVIAHRGASGYLPEHTLPAKA-AYAQGADYLEQDLVT-KDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKG--ELNLVQLIAYTDWNETQQKQPDGSWVNYNYD--WFKPGAKQVAEYADGIGPDYHLIEE-TSQPGNIKLT-GVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNK-
2	SPARKS	1t8qa	0.928	0.891	5.056	threading_2	----------------------------NEKIVIAHRGASGYLPEHTLPAK-AAYAQGADYLEQDLV-TKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEP--KGELNLVQLIAYTDWNETQQKQPDGSWVNYNYD--WFKPGAKQVAEYADGIGPDYHLIEETSQPGN--IKLTGVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN--
3	PROSPECT2	1t8qA	0.843	0.891	4.099	threading_3	----------------------------NEKIVIAHRGASGYLPEHTLPAKA-AYAQGADYLEQDL-VTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEP----KGELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWFKPGAKQVAEYADGIGPDYHLIEET--SQPGNIKLTGVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN--
4	PPA-I	1t8qB	0.925	0.894	3.041	threading_4	----------------------------NEKIVIAHRGASGYLPEHTLPAKA-AYAQGADYLEQDLVT-KDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEP--KGELNLVQLIAYTDWNETQQKQPDGSWVNYNY--DWFKPGAKQVAEYADGIGPDYHLIEETSQPGNIKLT--GVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNK-
5	HHPRED-l	1ydy_A	1.000	0.916	4.989	threading_5	----------------------------NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN--
6	HHPRED-g	1ydy_A	1.000	0.916	4.957	threading_6	----------------------------NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN--
7	SP3	1t8qa	0.934	0.891	4.923	threading_7	----------------------------NEKIVIAHRGASGYLPEHTLPAK-AAYAQGADYLEQDLV-TKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKG--ELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWFKP--GAKQVAEYADGIGPDYHLIEETSQPG--NIKLTGVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN--
8	SAM-T99	1t8qB	0.931	0.894	5.256	threading_8	----------------------------NEKIVIAHRGASGYLPEHTLPA-KAAYAQGADYLEQDLV-TKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFP-GKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPK--GELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWFKP--GAKQVAEYADGIGPDYHLI--EETSQPGNIKLTGVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNK-
9	MUSTER	2oogD	0.335	0.735	1.970	threading_9	--------------------QWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNEKASYIEIDLQRTKDGHLVAMHDETVNRTTN------------GHGKVEDYTLDELKQLDAGSWFNKK-------YPKYARASYKNAKVPTLDEILERYG-------PNANYYIETKSPDVY----PGMEEQLLASLKKHHLLNKNGHVMIQSFSDESLKKIHRQN-K----HVPLVKLVDKGELQQ------------------FNDQRLKEIRSYAIGLGPDYTDLT-----------EQNTHHLKDLGFIVHPYTVNE-----------KADMLRLNKYGVDGVFTNFADKYKEVIKEG
10	SPARKS	3qvqa	0.255	0.690	3.737	threading_10	----------------------GQSAYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDV-LSGDGIPVIFHDDYLSRTTD------------GDGLIYKTPLAELKQLDAGSWKGQE---------------YQQETIPTLLEAIEVISQ-------YGGLNLELKPC---EGLEEETIAASVEVLKQHW--PQDLPLLFSSFNYFALVSAKAL-WP----EIARGYNVSAIPSA--------------------WQERLEHL--DCAGLHIHQSFFD-----------VQQVSDIKAAGYKVLAFTINDESLALKLYN-----------QGLDAVFSDYPQKIQSAIDSH

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.944 to 1t8qB TM-score=0.987 to native SCOP code=c.1.18.3	TM-score=0.945 to 1t8qB TM-score=0.984 to native SCOP code=c.1.18.3	TM-score=0.942 to 1t8qB TM-score=0.980 to native SCOP code=c.1.18.3	TM-score=0.943 to 1t8qB TM-score=0.980 to native SCOP code=c.1.18.3	TM-score=0.944 to 1t8qB TM-score=0.985 to native SCOP code=c.1.18.3

Experimental Structure

Download 1ydyA

SCOP code=c.1.18.3