Template-based Modeling Results for GLPA_ECOLI

Submitted Primary Sequence

>Length 542
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCHHCEEEEEECCCEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCEEEEEEEEEECCCCEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
55443232000000000000000001002230200001231103100131110011002112110300220011021023003200110100000022211100000020023102201001131023222202320100010010100000000000110342102001001011012224200002021123232020201000000000011003103231311102000000123123100010242220000010220000000124132332432302231021002102300220232100100000100022333322431121100021223312300000000300113110210020003302323312123120221332122102311212221001002200310110023032232110303210101011002122021021011002111120202100010000014122122220121012012211322221010210110100100020001134344334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
1	MUSTER	2qcuB	0.245	0.889	3.142	threading_1	-----METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLPAWMIRIGLFMYDHLGKRTSLPGSTGLFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGPSPYGIRLIKGSHIVVPRVHTQQAYILQNEDKRIVFVIPWDEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTHFKQLSRDDIVWTYSGVRPLC-DDESDSPQAITRDYTLDIHD-ENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDGHEFYEAELKYLVDHEWVRRADDALWRTKQGMWLNQQSRVSQWLVEYTQQRLSLAS---------------------------------------------------
2	SPARKS	2qcua	0.248	0.886	5.341	threading_2	-------TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLPAWMIRIGLFMYDHLGKRTSLPGSTGLFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGPSPYGIRLIKGSHIVVPRVHTQKAYILQNEDKRIVFVIPWDEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTHFKQLSRDDIVWTYSGVRPLC-DDESDSPQAITRDYTLDIHDE-NGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGDFGHEFYEAELKYLVDHEWVRRADDAWRRTKQGMWLNQQSRVSQWLVEYTQQRLSLAS---------------------------------------------------
3	PROSPECT2	2qcuA	0.242	0.886	5.200	threading_3	-------TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKVFVIPWMDEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTHKKQLSRDDIVWTYSGVRPLCDDESD-SPQAITRDYTLDIH-DENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEFGHEFYEAELKYLVDHEWVRRADDLWRRTKQGMWLNADQRVSQWLVEYTQQRLSLAS---------------------------------------------------
4	PPA-I	2qcuB	0.237	0.889	5.143	threading_4	-----METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLPAWMIRIGLFMYDHLGKRTSLPGSTGRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGPSPYGIRLIKGSHIVVPRVHTQKAYILQNEDKRIVFVIPWMEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTHFKQLSRDDIVWTYSGVRPLCDDE-SDSPQAITRDYTLDIHD-ENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDGHEFYEAELKYLVDHEWVRRADDALWRTKQGMWLNADSRVSQWLVEYTQQRLSLAS---------------------------------------------------
5	HHPRED-l	3da1_A	0.281	0.821	4.532	threading_5	IGE-SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVE-NDFASGTSSRSTKLVHG--------------VGKERAIVYENAPHVTTPEW-LLPIFK--------------------RY-LNEKQTLEKEPLLRKELKGGGIYVEYRTDDARLTLEI-KEAVARGAVALNY-KVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKGKLKLSKGVHLVVDQSRFPLRQVYFDSDGR-IFAIPREGKTYIGTTDTFYDK-DIASPR-TVEDRDYILAAANY-FPRLTADDVESSWAGLRPLIE-------------DEIFF-----SDSGLISIAGGKLTGYRK-AERTVDAVAQGLNVNEPCTTAAIRLSGGLEGARDASRKGAGFDADEVRRLAKLYGSNVDHVLNYGKEEAEHY-GLPALLLGQLQYGVEQE-VATPLDFVRRTGALFNISLVHQWKEAVLRW-AEEFSWTEEEKTRFQNELET-VDPLFQVE------------------------------
6	HHPRED-g	3da1_A	0.278	0.828	5.617	threading_6	IGE-SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVE-NDFASGTSSRSTKLVHG--------------VGKERAIVYENAPHVTTPEW-LLPIFK--------------------RY-LNEKQTLEKEPLLRKNLKGGGIYVEYRTDDARLTLEI-KEAVARGAVALNY-KVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKGKLKLSKGVHLVVDQSRFPAVYFD-TSDGR-IFAIPREGKTYIGTTDTFYD-KDIASPR-TVEDRDYILAAANY-FPRLTADDVESSWAGLRPLIHE-----------------DEIFFSDSGLISIAGGKLTGYRK-AERTVDAVAQGLNVNEPCTTAAIRLSGGLEGARASRKGALGFDADEVRRLAKLYGSNVDHVLNYAYEGKEHY-GLPALLLGQLQYGVEQE-VATPLDFVRRTGALFFNSLVHQWKEAVLRW-AEEFSWTEEEKTRFQNELETELK-AVDPLFQVE--------------------------
7	SP3	2qcua	0.250	0.886	5.769	threading_7	-------TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRGLFMYDHLGKRTSLPGSTGLRFGASVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEKRIVFVIPWDEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTFKKQLSRDDIVWTYSGVRPLC-DDESDSPQAITRDYTLDIHD-ENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGDFGHEFYEAELKYLVDHEWVRRADDAWRRTKQGMWLNQQSRVSQWLVEYTQQRLSLAS---------------------------------------------------
8	SAM-T99	2qcuB	0.251	0.845	6.392	threading_8	---------DLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHRPAWMIRIGLFMYDHLGKRSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWI-VEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLYGIRLIKGSHIVVPRVHTQKAYILQNEDKRIVFVIPWDEFSIIGTTDVEYKG-DPKAVKIEESEINYLLNVYNTHFKQLSRDDIVWTYSGVRPLC-DDESDSPQAITRDYTLDIHD-ENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGARLRRRYPFLTESLARHYARTYGSNSELLLGAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALRRTKQGMWLNA-----------------------------------------------------------------------
9	MUSTER	2rghA	0.230	0.908	2.922	threading_9	IQKQQ-EELDLLIIGGGITGAGVAVQAAASGIKTGLIEQ-DFAEGTSSRSTKLVHGGIRYLKFDVEVVADTVGERAVVQGIAPHIPKPDPLLPIYEDEGAKVADLYDKLANVTTKYENYTLTPEEVLEREPFLKKELKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRSPKRPTKGIHLVVDAKKLPPTYFDTGKQDGRVFAIPRENKTYFGTTDTDYQ-GDFTDPKVTQEDVDYLLDVINHRYPNITLADIEASWAGLRPLLIGS------SLERE-----------PDGLLTLSGGKITDYR-KAEGALRLIRQLLKETKEIDSKKYQISGGNFDELAKEGVAAGLEEEDATYIADFYGTNARRIFELAK--EAPYPGLSLAESARLRYGLEEEVLAPGDYLIRRTNHLLFERDQLDIKQPVIDAIAEYFGWTEEEKAQQTKRLEALIAESDLRELKGE--------------------------
10	SPARKS	2r46a	0.247	0.882	5.219	threading_10	-----METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLPAWMIRIGLFMYDHLGKRTSLPGSTGLFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGPSPYGIRLIKGSHIVVPRVHTQKQAYILQEDKRIVFVIPWDEFSIIGTTDVEYK-GDPKAVKIEESEINYLLNVYNTHFKQLSRDDIVWTYSGVRPLC-DDESDSPQAITRDYTLDIHDE-NGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGDFGHEFYEAELKYLVDHEWVRRADDAWRRTKQGMWLN--ADQQSRVSQWLVEYTQQ-----------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.655 to 2gb0B SCOP code=c.3.1.2	TM-score=0.655 to 2gb0B SCOP code=c.3.1.2	TM-score=0.654 to 2gb0B SCOP code=c.3.1.2	TM-score=0.658 to 2gb0B SCOP code=c.3.1.2	TM-score=0.653 to 2gb0B SCOP code=c.3.1.2