Template-based Modeling Results for GLDA_ECOLI

Submitted Primary Sequence

>Length 367
MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE
CCCEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE
5522010111000022002200300331232000000320111002101400341202010000223012310220111033120000000010300000100021020000000000112120000000013322112100023002000000300120122000000000001001010013212221210200100100021002101210330022034222220022001000000000121000000000000011023012101011000000010012211221021002003302011102203133312210310021002223102201120113101200110240023024325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE
1	MUSTER	1jq5A	0.500	0.992	3.168	threading_1	AERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIANAPPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTLLSGLGFESGGLAAAHAIHNGFTALEEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDASREDILKVAKAATAEGETIHN-AFNVTADDVADAIFAADQYAKAYKEK--
2	SPARKS	3owoa	0.198	0.907	4.990	threading_2	ASSTFYIPFVNEMGEGSLEKAIKDLNGSGKNALIVSDAFMNKSVVKQVADLLKAQGINSAVYGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATLPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAAT--------------PITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLP-----HGVCNAVLLPHVLAEGAEATIQAVRDLAASIGIPANLTELGAK---KEDVPLLADHALKDACALTN-PRQGDQKEVEELFLSAF-----------
3	PROSPECT2	3uhjA	0.457	0.959	4.457	threading_3	-ARAFGGPNKYIQRAGEIDKLAAYLAPLGKRALVLIDRVLFDALSERI-------SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIASTDAPCSAIAVRYTEHGVYEEALRLPRNPDAVVVDSALVAAAPARFLVAGIGDALSTWFEARSNIERTDNYVAGGFPATEAGAIARHCQDVLTRDAVKAKIAVEAGLLTPAVENIIEANTLLSGLGFENCGCSAAHGIHDGLTVLEEVHGYFHGEKVAFGTLCLLLENRD--RAEIEAIRFCRSVGLPTKLADLGIVDDVPAKIGRVAEAACRPGNIIYATPVTITVPAVRDAILALDAFSRS-----I
4	PPA-I	1jq5A	0.500	0.992	4.005	threading_4	AERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIANAPPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTLLSGLGFESGGLAAAHAIHNGFTALEGIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDASREDILKVAKAATAEGETIHN-AFNVTADDVADAIFAADQYAKAYKEK--
5	HHPRED-l	1ta9_A	0.424	0.984	4.001	threading_5	KDRIFTSPQKYVQGRHAFTRSYMYVKKWAKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCP-DDTQVIIGVGGGKTMDSAKYIAHSMNLPSIICPTTASSDAATSSLSVIY----QFQKYSFYPLNPNLIFIDTDVIVRAPVRFLISGIGDALSTWVETESVIRSNSTSFAGGVASIAGRYIARACKDTLEKYALSAILSNTRGVCTEAFENVVEANTLMSGLGFENGGLAAAHAIHNGMTAIHGPVRLMHGEKVAYGTLVQVVLEDWPLEDFNNLASFMAKCHLPITLEELGIPNVTDEELLMVGRATLRPDESIHNMSKKFNPSQIADAIKAVDSYSQKWQEQT-
6	HHPRED-g	1ta9_A	0.425	0.986	3.967	threading_6	KDRIFTSPQKYVQGRHAFTRSYMYVKKWAKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKTMDSAKYIAHSMNLPSIICPTTASSDAATSSLSVIY----QFQKYSFYPLNPNLIFIDTDVIVRAPVRFLISGIGDALSTWVETESVIRSNSTSFAGGVASIAGRYIARACKDTLEKYALSAILSNTRGVCTEAFENVVEANTLMSGLGFENGGLAAAHAIHNGMTAIHPVHRLMHGEKVAYGTLVQVVLEDWPLEDFNNLASFMAKCHLPITLEELGIPNVTDEELLMVGRATLRPDESIHNMSKKFNPSQIADAIKAVDSYSQKWQEQTG
7	SP3	3owoa	0.198	0.907	4.995	threading_7	ASSTFYIPFVNEMGEGSLEKAIKDLNGSGKNALIVSDAFMNKSVVKQVADLLKAQGINSAVYGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATLPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAAT--------------PITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLP-----HGVCNAVLLPHVLAEGAEATIQAVRDLAASIGIPANLTELGAK---KEDVPLLADHALKDACALTN-PRQGDQKEVEELFLSA--F---------
8	SAM-T99	1kq3A	0.532	0.984	4.636	threading_8	MITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNLGENFFSSFTKVRVN--KQIFGGECSDEEIERLSGLVE-EETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLSGLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDEDLMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKN---
9	MUSTER	1kq3A	0.530	0.986	3.102	threading_9	MITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVGENFFSSFTKVRVNKQIF--GGECSDEEIERLSGLVE-EETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLSGLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDEDLMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL--
10	SPARKS	1kq3a	0.528	0.986	4.721	threading_10	MITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVGENFFSSFTKVRVNKQIF--GGECSDEEIERLSGLV-EEETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLSGLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDEDLMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.992 to 1jq5A SCOP code=e.22.1.2	TM-score=0.992 to 1jq5A SCOP code=e.22.1.2	TM-score=0.853 to 1jq5A SCOP code=e.22.1.2	TM-score=0.931 to 1jq5A SCOP code=e.22.1.2	TM-score=0.992 to 1jq5A SCOP code=e.22.1.2