Template-based Modeling Results for GLCA_ECOLI

Submitted Primary Sequence

>Length 560
MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCHHHHEECHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS
55202212221201000000000000000000011213021000000000000000002020310010001000200110000000000012102111212002100220231220000000000000010011110101000000110113101000000001101001000001000003012121210010002001000000000000101012101300100000000000000000211002001000000000000000210323323212222312121123332222322232211200200000000000000121321311112110010000203011012101302221232222200020000000000000000000001102132001001200110110000000000001001100100000100101120000001000000010111210010000100010033040121000001100000031000100000000012213112001100100000000000000000100212124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS
1	SPARKS	2xwub	0.089	0.959	1.062	threading_1	PCAVADMVRLFQAGRCLALLELLTVLPEEFQTSRLLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVLQDCEALIQAAFAA--LQDSELFDSSVEAIVNAYVNTLLKLIPLVLGLQEQLRQAVQNGDMSHGICRIAVALGWQSFLALVNMIMFCTGTTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLM---YVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETIDVNYSDV-----VPGLIGLINVQLADTVMFTIGALSEWLADHPVMSVLPLVLHALGNPTLKKICRECKYDLPPYAANIVAVSQDVLMKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLANPSNKLAIVH---ILGLLSNLFTTLDIVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHF----------PPIEALFLLVTSVTLTLFQQG
2	PROSPECT2	1qgra	0.070	0.975	2.351	threading_2	MEILEKTVSPAVENLPTFLVELSRVLAQIKNSLTSKDPDIKAQYASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPLTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMATQCPDTRVRVAALQNLVKIMSLYYQYMALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEAPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFTAAWTVGRICELLPEAAINDVYLYEAADVADDQEEPATYCLSSSFELIVQKLLETSAYESLMEIVKNSAKDCYPAVQKTTLV---------IMERLQQVLQMESHIQSTS-----DRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMEDALMAVSTLVEVLGGEFLKYMFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGVHRSVKPQILSVFGDIALAIGGENTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGVEFILSFIDQA
3	PPA-I	1b3uA	0.099	0.886	1.177	threading_3	---------------------------------------------AYPIAVLIDELRNEDVQLRLNSIKKLSTIALALG----------------VERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEII-PMFSNLASDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKIIEYMPLLAGQLGVEF-FDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGNYLHRMTTLFCINVLSEVCG-QDITTKHMLPTVLRMAGVANVRFNVAKSLQKIGPI
4	SPARKS	2bkub	0.105	0.966	1.021	threading_4	ETQLKKLSNDNFLQFAGLSSQVLKLEGRILAALTLKLVSKDSVKTQQFAQRWITQV-----SPEAKNQIKTNALTALVEPRIANAAAQLIAAIADIHGAWELMKIMVDNTGAEQENVKRASLLALGYMCESADALVSSNNILIAIVQGAQSTAVRLAALNALADSLI------------FIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDTRQNEDPEDDDWNLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILN--LMNDQSLQVKETTAWCIGRIADSVAESIDLPGVVQACLIGLQDPKVATNCSWTIINLVEQLAEATLVDGLIGAANRIDNEFNARASAFSALTTMVEYAAETSASISTFVMDKLGQTMSVDQSLQELQSNILTVLAAVISPSSVPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFLETFSPY
5	PROSPECT2	1b3ua	0.057	0.938	2.322	threading_5	LYPIAVLIDELRNEDVQLRLNS--IKKLSTIALALGVERTRSELLPFLVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLTVVRDKAVESLRAISHEHSPSDLEAHFVPLGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRLCSDDTPMVRRAAASKLGEFAK-----------------VLELDNVKSEIIPMFSNLAAVEACVNIAQLLPQEDLEALVMPTLRQAAESWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVN-----------EVIGIRQLSQSLLPAIVELAEDAKWRAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYASNLKKLVEKFGKEW-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC----GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLVKYFAQEALTVLSLA
6	PPA-I	2x1gF	0.051	0.971	1.072	threading_6	ERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSESLAKWSSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLFQSVAEHRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMYIPPAINLLVRGLNSSMSAQATLGLLQLKPYADPLLNACHASLNTGRMK-----------NSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQATPAARIRTIF-RLNMISTLFSSLNTPMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQ---CCAPTLEISKTAI-VMFFKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMET
7	PROSPECT2	2bkuB	0.111	1.000	2.177	threading_7	MSTENSILSPLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKKTQQFAQRWITQVSPEAKNQIKTNALTALVSANAAAQLIAAIADIELPHGAWPELMKIMNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGTSKAVRLAALNALADSLIFIKNNMEREGERNYATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALSMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGAEQNITADNWMDGPDKVQRTYYVHQALPSILNLMNDQSLQETTAWCIGRIADSVAESIDPQIINLVEQLAEATPSPIYNFYPALVDGLNEFNARASAFSALTTMVEYATDTEDAQSLQELQSNILTVLAAVILMGLFFRLLEKKDSAFIEDDVFYANQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPPAVLSVFGDIASNIGADFIPYVLDAYVGIVAGLHDKPEALFPYVGTIFTSRAAVGLIGDIAAMFQKRQLSL
8	PPA-I	1xm9A	0.092	0.734	1.059	threading_8	----------------------------------------------------------------------------------------------------------------------------------------GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSG-LIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGS-----GWLYHSDAIRTYLNLMGKS----KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS---GNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQG
9	PROSPECT2	1jdha	0.081	0.859	2.176	threading_9	IPELTKLLNDEDQVVVNKAAVMV------HQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAG---------TLHNLSHHREGLLAIFKSGGIPAL---VKMLGSPVDSVLFYAITTLHNLLLHQEG-------AKMAVRLAG---GLQKMVALLNKT---------------------NVKFLAITTDCLQILAYGNQESKLIILASGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPA---IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN-----KMMVCQVGGIEALVRTVLRAGD------------------REDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKWPLIKATVGLIRNLALCPANHAPLRE--QGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLVATYAAAVLFRM--S
10	PPA-I	1qgkA	0.096	0.954	1.046	threading_10	LAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTYAKGALQYLVPILTQTLTKQDNPCKAAGVCLMLLEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP------EPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELYLAPLLQCLIEGLSASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNN---LRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMER--------LQQVLQMESHIQSTSDRIQF---------NDLQSLLCATLQNVLRKVQSDVVMASLLRMFQSGGVQEDALMAVSTLVEVLGGEFAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRIIPFCDEVMQLLLENLGNENVHRSPQILSVFGDIALAIGGEFKEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVH

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.549 to 2q6hA SCOP code=f.54.1.1	TM-score=0.541 to 1m8xA SCOP code=a.118.1.8	TM-score=0.655 to 1qgkA SCOP code=a.118.1.1	TM-score=0.818 to 1b3uA SCOP code=a.118.1.2	TM-score=0.869 to 1b3uA SCOP code=a.118.1.2