Template-based Modeling Results for GFCB_ECOLI

Submitted Primary Sequence

>Length 214
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
4311000000000010222132012001100133431200231033132100002034142000000002322010012221000012000010020231112011223121221121231110110011133120100101010213222102012320201001120202423220100000122312011021000221110102002336
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
1	MUSTER	2in5A	0.931	0.883	3.311	threading_1	------------------HSQQSVDTFRASLFD---NQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAG-VIPVET-FLKPAP
2	SPARKS	2in5a	0.958	0.883	3.987	threading_2	------------------HSQQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
3	PROSPECT2	2in5A	0.915	0.883	2.939	threading_3	------------------HSQQSVDTFRASLFDNQV---ADQQIQALPYS-TYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAGVIPVE--TFLKPAP
4	PPA-I	2in5A	0.915	0.883	6.186	threading_4	------------------HSQQSVDTFRASLFD---NQVADQQIQALPYS-TYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAG--VIPVETFLKPAP
5	HHPRED-l	2in5_A	1.000	0.879	11.791	threading_5	-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVE-TFLKPA-
6	HHPRED-g	2in5_A	1.000	0.883	10.601	threading_6	-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVE-TFLKPAP
7	SP3	2in5a	0.958	0.883	1.976	threading_7	------------------HSQQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
8	SAM-T99	2in5A	0.973	0.874	6.008	threading_8	--------------------QQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
9	MUSTER	3fzxA	0.137	0.855	0.724	threading_9	---------------CAFPNQE-GEQITRNCYTADGKLTNI-----LVYRVDQAYEYPSGEVVANYTFADAAGKTLNSGQVA--RCSDGNFS---GDVATFPTALNNAPDAFSNPNPGDDDETLRLYQKGNKNNRAEISVFDREFV--TTETVNTPAGAFYCTKVKYENIWTPKEIKGYGYEWYAPNIG-IVRSEQYNNKKQSYSVLERIKK--
10	SPARKS	3mh8a	0.160	0.846	0.720	threading_10	--------------GPLPDAKPLVEEATAQTKALKSAHMVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGDADFVVFDGILYAT---------LTPNQWSDFGPAADDPAQVLNPDTGLANVLA--------NFADAKAEGRDTINGQNTIRISG-KVSAQAVNQIAPPFNATQPVPATVWIQETGDQLAQAQLDRGSG-NSVQMTLSKGEK

Predicted Tertiary Structure


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TM-score=0.907 to 2in5A TM-score=0.965 to native SCOP code=b.177.1.1	TM-score=0.917 to 2in5A TM-score=0.976 to native SCOP code=b.177.1.1	TM-score=0.914 to 2in5A TM-score=0.973 to native SCOP code=b.177.1.1	TM-score=0.922 to 2in5A TM-score=0.982 to native SCOP code=b.177.1.1	TM-score=0.916 to 2in5A TM-score=0.975 to native SCOP code=b.177.1.1

Experimental Structure

Download 2in5A

SCOP code=b.177.1.1