Template-based Modeling Results for GCST_ECOLI

Submitted Primary Sequence

>Length 364
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA
CCCCCCCHHHHHHCCCEEEEECCEECCEECCCHHHHHHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHCCCCHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECHHHHHHHHHHCCHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA
5533011231024000100100002010101111210100133000010010000102023022002200022023023202000000013210000000000013310000000101210010014104321020102210000001012012101300331022012111100102201000000112121001000113100200300031202000000100000210000111201320001102010001233232311023002222432221000000234211333010102224222200100011101202100000002222122010202423020200211224434224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA
1	MUSTER	1wopA	0.412	0.973	3.853	threading_1	M-KRTPLFEKHVELGAKMVDFAGWEMPLYYTSIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSL-PDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVEVSNSDTTALIAFQGPKAQETLQELVEDGLEEIAYYSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLDGRPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVVKLNK---DFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVLK----NGERVGEITSGNFSPTLGKSIALALVSKSVGDQLGVVFPGKLVEALVVKKPFYRGSVRR-
2	SPARKS	3tfha	0.194	0.964	6.963	threading_2	RLRSTPYTSRIEKQGVTYTIYNHMLLPAAFGSIEDSYKHLKEHVQIWDVAAERQVEISGKDSAELVQLMTCRDLSKS-KIGRCYYCPIIDENGNLVNDPVVLKLDENKWWISIADSDVIFFAKGLASGH-KFDVKIV-EPVVDIMAIQGPKSFALMEKVFGKKITELKFFGFDYFDFEGTKHLIARSGWSKQGGYEVYVETQSGQKLYDHLFEVGKENVGPGCPLIERIESALLSYGNDFDNNDNPFECGFDQYVSLDS-DINFLGKEKLKEIKLKGPKKLRGVKIDIKEISLTGSKNIYD--ENNNVIGELRSACYSPHFQKVIGIAMIKWEASQGFKIQINDNTINGNVCDLPFI-------
3	PROSPECT2	3tfhA	0.197	0.964	6.509	threading_3	MLRSTPYTSRIEKQGVTAYIYNHMLLPAAFGSIEDSYKHLKEHVQIWDVAAERQVEISGKDSAELVQLMTCRDLSKS-KIGRCYYCPIIDENGNLVNDPVVLKLDENKWWISIADSDVIFFAKGLASGH-KFDVK-IVEPVVDIMAIQGPKSFALMEKVFGKKITELKFFGFDYFDFEGTKHLIARSGWSKQGGYEVYVETQSGQKLYDHLFEVGEFNVGPGCPNLIRIESALLSYGNDFDNNDNPFECGFDQYVSLDS-DINFLGKEKLKEIKLKGPKKLRGVKIDIKEISLTGSKNIY--DENNNVIGELRSACYSPHFQKVIGIAMIKWEASQGFKIQINDNTINGNVCDLPFI-------
4	PPA-I	1wopA	0.410	0.973	7.095	threading_4	-MKRTPLFEKHVELGAKMVDFAGWEMPLYYTSIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSLP-DGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVEVSNSDTTALIAFQGPKAQETLQELVEDGLEEIAYYSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLDGRPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVVKLNK---DFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVLK----NGERVGEITSGNFSPTLGKSIALALVSKSVGDQLGVVFPGKLVEALVVKKPFYRGSVRR-
5	HHPRED-l	1vlo_A	1.000	0.953	5.019	threading_5	---QTPLYEQHTLCGAR-VDFHGW--PLHYGSQIDEHHAVRTDAG-FDVSH-TIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSG-LNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLS-IAVQGPNAQAKAATLFNDAQRQAVEG-KPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAG-NLYGQE-DETISPLAAN-GWTIAWEPADRDFIGREALEVQREHGTEKLVGLV-TEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNRE-PVKVTKPVFVRNGKAV-
6	HHPRED-g	1vlo_A	1.000	0.956	4.175	threading_6	---QTPLYEQHTLCGAR-VDFHGW--PLHYGSQIDEHHAVRTDAG-FDVSH-TIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSG-LNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLS-IAVQGPNAQAKAATLFNDAQRQAVEG-KPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAG-NLYGQE-DETISPLAAN-GWTIAWEPADRDFIGREALEVQREHGTEKLVGLV-TEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNRE-PVKVTKPVFVRNGKAVA
7	SP3	3tfha	0.191	0.964	7.164	threading_7	RLRSTPYTSRIEKQGVTYTIYNHMLLPAAFGSIEDSYKHLKEHVQIWDVAAERQVEISGKDSAELVQLMTCRDLSKSK-IGRCYYCPIIDENGNLVNDPVVLKLDENKWWISIADSDVIFFAKGLASG-HKFDV-KIVEPVVDIMAIQGPKSFALMEKVFGKKITELKFFGFDYFDFEGTKHLIARSGWSKQGGYEVYVETQSGQKLYDHLFEVGKFNVGPGCPLIERIESALLSYGNDFDNNDNPFECGFDQYVSLDS-DINFLGKEKLKEIKLKGPKKLRGVKIDIKEISLTGSKNIYD--ENNNVIGELRSACYSPHFQKVIGIAMIKWEASQGFKIQINDNTINGNVCDLPFI-------
8	SAM-T99	1wopA	0.410	0.973	5.554	threading_8	-MKRTPLFEKHVELGAKMVDFAGWEMPLYYTSIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSL-PDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFVEVSNISDTTALIAFQGPKAQETLQELVEDGLEEIAYYSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLLGRPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVVKLNK---DFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVL----KNGERVGEITSGNFSPTLGKSIALALVSKKIGDQLGVVFPGKLVEALVVKKPFYRGSVRR-
9	MUSTER	3girA	0.323	0.970	3.708	threading_9	L-KTLPLYELHEKAGAKFGAFAGWRMPLTYPGVLKEHLHTRAHAGLFDISHMKLIAVEGPKAVEFLSYALPVDAALL-KIGQSRYSYLLNERAGILDDLILTRLAECRFMLVANAGNAQADFAELEKRAFGFEC-QVIALERVLLALQGPQAAAVLADA-GLPGNELLFM---QGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEKLLGDRVEWVGLAARDSLRLEAGLCLHGNDITPDTTPIDAALTWAVPKNREKAQFYGAKAFLESLQKGPRCRVGLKPQTRQPIRAGAVLFD---NEGNRIGVVTSGGFGPSFDGPVAMGYVPVAWGTEVFTELRGKKIALSVHSLPFVEQRYFK-
10	SPARKS	1wooa	0.410	0.973	6.136	threading_10	-MKRTPLFEKHVELGAKMVDFAGWEMPLYYTSIFEEVMAVRKSVGMFDVSHMGEFLVKGPEAVSFIDFLITNDFSSL-PDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVEVSISDTTALIAFQGPKAQETLQELVEDGLEEIAYYSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPKVWDALMNLDGRPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVVKLNK---DFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVLK----NGERVGEITSGNFSPTLGKSIALALVSKSVGDQLGVVFPGKLVEALVVKKPFYRGSVRR-

Predicted Tertiary Structure


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TM-score=0.972 to 1wopA TM-score=0.939 to native SCOP code=b.44.2.1	TM-score=0.973 to 1wopA TM-score=0.929 to native SCOP code=b.44.2.1	TM-score=0.894 to 1wopA TM-score=0.876 to native SCOP code=b.44.2.1	TM-score=0.893 to 1wopA TM-score=0.864 to native SCOP code=b.44.2.1	TM-score=0.972 to 1wopA TM-score=0.937 to native SCOP code=b.44.2.1

Experimental Structure

Download 3a8iA

SCOP code=b.44.2.1