Template-based Modeling Results for GALF_ECOLI

Submitted Primary Sequence

>Length 297
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
CCCCEEEEECCCCCCCCCCHHCCCCCCCCEECCCEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
552110000000100110100211132101002100020001101401021000001213210221012122012203432333002102210422020000122222100000000130033210000000000112213213200100022034224100001211221220000102322244231020210122143243120000000000011100100340321221100001001100532201000020101101221000200020002123002202400231144
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
1	MUSTER	3jujA	0.375	0.916	3.771	threading_1	M-IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHD---HPSVLKQMTSLYQKYQCSIVAIEEVAEEVSKYGVIRGEWL---EEGVYEIKDMVEKPN-QEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL----------------
2	SPARKS	3juja	0.371	0.916	7.275	threading_2	-MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDH---PSVLKQMTSLYQKYQCSIVAIEEVAEEVSKYGVIRGEWL---EEGVYEIKDMVEKPN-QEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL----------------
3	PROSPECT2	3jujA	0.368	0.916	5.237	threading_3	M-IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHP---SVLKQMTSLYQKYQCSIVAIEEVALEVSKYGVIRGEWLE---EGVYEIKDMVEKPN-QEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKR----------------L
4	PPA-I	3jujA	0.371	0.916	7.292	threading_4	-MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHP---SVLKQMTSLYQKYQCSIVAIEEVAEEVSKYGVIRGEWL---EEGVYEIKDMVEKPN-QEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL----------------
5	HHPRED-l	2e3d_A	0.572	0.953	3.611	threading_5	--VKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLE----RQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPK-ADVAPSNLAIVGRYVLSADIWPLLAKTPP----EIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEM--
6	HHPRED-g	2e3d_A	0.575	0.960	3.845	threading_6	TKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLE----RQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPV-ADVTAYGVVDCKGVELAPGESVPMVGVVEKPK-ADVAPSNLAIVGRYVLSADIWPLLAKTPP----EIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEM--
7	SP3	3juja	0.375	0.916	6.905	threading_7	M-IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCI---SHDHPSVLKQMTSLYQKYQCSIVAIEEVAEEVSKYGVIRGEWL---EEGVYEIKDMVEKPN-QEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL----------------
8	SAM-T99	2ux8G	0.404	0.960	6.776	threading_8	KPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARGKS--LDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFG-----QPGCLKQMVDAYNKVGGNLICAEEVPDDTHRYGIITPGT---QDGVLTEVKGLVEKPA-PGTAPSNLSVIGRYILQPEVMRILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRPDLEPAVRAFAVKALG-
9	MUSTER	2e3dC	0.570	0.963	3.708	threading_9	TKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLER----QLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPV-ADVTAYGVVDCKGVELAPGESVPMVGVVPKA---DVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEE---
10	SPARKS	2pa4a	0.336	0.963	5.606	threading_10	--VKTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMERGKTDQVEIIRRAADL-IKAVPVTQDKPLGLGHAVGLAESVLDDDEVAVMLPDDLVLPT------GVMERMAQVRAEFGGSVLCAVEVSADVSKYGIFEIEA-DTKDSDVKKVKGMVEKPA-IEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEGPVHIVIHQGKRHDLGNPGGYIPACVDFGLSHPVYGAQLKDAIKQILAE

Predicted Tertiary Structure


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TM-score=0.758 to 1mc3A SCOP code=c.68.1.6	TM-score=0.752 to 1hm8A SCOP code=b.81.1.4	TM-score=0.764 to 1g3lD SCOP code=c.68.1.6	TM-score=0.752 to 1hm8A SCOP code=b.81.1.4	TM-score=0.766 to 1mc3A SCOP code=c.68.1.6