Template-based Modeling Results for GADW_ECOLI

Submitted Primary Sequence

>Length 242
MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS
CCEEEEEEEECCCCEEEECCEEEEECCCCEEEECCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS
44100000001220101124220102431000023212320000232112000111000200220220022103313331123312212001100210142112221001100110010011132012112322220011003002311234020310033011021002210342422022001001010023014323120310023011211110020014123101320142232334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS
1	MUSTER	3gbgA	0.197	0.967	2.410	threading_1	YINDYKMFWISGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITIS---DSFIRSLKSYILGNKDLLLWNCEHDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYN--SIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
2	SPARKS	3gbga	0.200	0.971	3.804	threading_2	YINDYKMFWISGIAKLIDKLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITIS---DSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSI--FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
3	PROSPECT2	3gbgA	0.196	0.971	2.908	threading_3	KSFQTNVYRMSKFDTYIFCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISD---SFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYN--SIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
4	PPA-I	3gbgA	0.200	0.971	2.954	threading_4	YINDYKMFWIDSGIAKLIDKVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITIS---DSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSI--FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
5	HHPRED-l	3gbg_A	0.193	0.942	4.190	threading_5	INDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLLSDNVSVITISDSFIRSLKSYILG--------NKDLLLNCEHNDIAVLSEVVNGFREINYS-DEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
6	HHPRED-g	3gbg_A	0.197	0.942	3.564	threading_6	INDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLTSDNVSVITISDSFIRSLKSYILG--------NKDLLLNCEHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
7	SP3	3gbga	0.170	0.971	4.058	threading_7	YINDYKMFWIDSIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSY--ILGNKDLLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEK--KYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--
8	SAM-T99	2k9sA	0.196	0.421	2.708	threading_8	--------------------------------------------------------------------------------------------------------------------------------------DNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAG------
9	MUSTER	2k9sA	0.190	0.434	1.392	threading_9	-------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE----
10	SPARKS	3ooua	0.225	0.421	2.268	threading_10	--------------------------------------------------------------------------------------------------------------------------------------SPIIQNVLSYITEHFSEG-SLKTLGNDFHINAVYLGQLFQKEGEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDA-YFYRQFKKHTGETPNRYRKIHQ----

Predicted Tertiary Structure


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TM-score=0.488 to 1d5yA SCOP code=a.4.1.8	TM-score=0.491 to 1d5yA SCOP code=a.4.1.8	TM-score=0.492 to 1d5yA SCOP code=a.4.1.8	TM-score=0.484 to 1d5yA SCOP code=a.4.1.8	TM-score=0.492 to 1d5yA SCOP code=a.4.1.8