Template-based Modeling Results for GADE_ECOLI

Submitted Primary Sequence

>Length 175
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF
CEEEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF
2101002111002001202232200202122102301332010000000110003200300350211100000111013022301000012321012001001132022322301122201200200133223220132021222102001110012030320110011002223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF
1	MUSTER	1rnlA	0.194	1.000	2.355	threading_1	TILLIDDHPMLRTGVKQLISMAPDITVVGEQGIELAELDPDLILLDLNMPGMNGLETLDKLREKSLGRIVVFSVDVVTALKRGADGYLLKDMDLLKALHQAAAGEMVLSEAASLQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
2	SPARKS	3c3wa	0.131	1.000	3.226	threading_2	MVFLVDDHEVVRRGLVDLLGADPELDVVSVAEAMARVARPDVAVLDVRLPDGNGIELCRDLLSRMPLRCLILTDEAMLDAILAGASGYVVKDIKGMELARAVKRSLLDKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR
3	PROSPECT2	1a04a	0.160	1.000	1.353	threading_3	EILLIDDHPMLRTGVKQLISMAPDITVSNGEQGLAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVHEEDVVTALKRGADGYLLKDMEPEDLLKAAGEMVLSLERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHERIF
4	PPA-I	1rnlA	0.171	1.000	2.536	threading_4	TILLIDDHPMLRTGVKQLISMAPDITVVGEQGIELAELDPDLILLDLNMPGMNGLETLDKLREKSLGRIVVFSVEDVVTALKRGADGYLLKDMEPEDLLKALHGEMVLSEAASLQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
5	HHPRED-l	1a04_A	0.163	0.983	2.808	threading_5	TILLIDDHPMLRTGVKQLISMAPDITASNGEQIELESLDPDLILLDLNMPGMNGLETLDKLREKSLSRIVVFSVSDVVTALKRGADGYLLKDMEPEDLLKALHQAAV--ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER-
6	HHPRED-g	1a04_A	0.160	1.000	2.557	threading_6	TILLIDDHPMLRTGVKQLISMAPDITVVGEQGIELAESDPDLILLDLNMPGMNGLETLDKLREKSLSRIVVFSVSDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMRDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
7	SP3	3c3wa	0.120	1.000	3.248	threading_7	MVFLVDDHEVVRRGLVDLLGADPELDVVVAEAMARVPARPDVAVLDVRLPDGNGIELCRDLLSRMPLRCLILTDEAMLDAILAGASGYVVKDIKGMELARAVKRGAAEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKR
8	SAM-T99	1yioA	0.158	0.977	2.710	threading_8	-VFVVDDDMSVREGLRNLLRSAGFEVTFDCASTHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGPIVFITAHGDVRAMKAGAIEFLPKPFEEQALLDAIEQGLQLNAERRQALTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEK---
9	MUSTER	1a04A	0.189	1.000	2.310	threading_9	TILLIDDHPMLRTGVKQLISMAPDITVVGEQGIELAELDPDLILLDLNMPGMNGLETLDKLREKSLSRIVVFSVDVVTALKRGADGYLLKDMDLLKALHQAAAGEMVLSEADVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI
10	SPARKS	1yioa	0.168	0.989	3.209	threading_10	TVFVVDDDMSVREGLRNLLRSAEVETFDCASTFLEHREQHGCLVLDMRMPGMSGIELQEQLTAISDIPIVFITAHMTVRAMKAGAIEFLPKPFEEQALLDAIEETQDQLEQLFSSLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEKY--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.896 to 1rnlA SCOP code=a.4.6.2	TM-score=0.889 to 1rnlA SCOP code=a.4.6.2	TM-score=0.560 to 1ys6B SCOP code=a.4.6.1	TM-score=0.846 to 1a04A SCOP code=a.4.6.2	TM-score=0.873 to 1rnlA SCOP code=a.4.6.2