Template-based Modeling Results for PTFC1_ECOLI

Submitted Primary Sequence

>Length 415
MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL
5533332221120121222223333224222012002001100021000000000000001001211232223210121121131211222113001002100000000000000000011001210000000000001122212212110121122221102100000000000000200222130232033022110111000001111222111210010010011002302330000000000000001110100100000000001221122101000010011000000001222113411323112201000000000002000000130111000000000000000000010101001100000000111000000000000000000100221123322222334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL
1	MUSTER	1pw4A	0.124	0.894	0.738	threading_1	-------------FKPAPHKARLPAAEIDPTYRRLRWQIFLGI--FFGYAAYYLVRKNFALAMPYLVEQSRGDLGFALSG-MGSVSDRSNPRVFLPAGLILAAAVMLFMGFPWATSSIAVMFV--LLFLCGWFQGMGWPPCGRTMVWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF-----------DWHAALYMPFCAILVALFAFAMMRDTPCGLPPIKQIFMQYVLP--NKLLWYIAIANVFVY----LLRYGILDWSPTYLKVKHFALDKSSWAYFLYEYAGIPGTLLCGWMVFRGN-----RGATGVFFMTLVTI---ATIVYWMGNPTVDMICMIVIGFLIYGPVMLIGLHALAP-GGSVAASAIGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELV
2	SPARKS	2xwub	0.079	0.976	0.812	threading_2	LDQVEHWQSFLALVNMGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAQQVYRPVYFQLVDVLLHKAQFPSDEEY--GFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGAL-SEWLADH---PVMINSVLPLVLHPELSVSSVSTLKKICLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLSPYIQEIPNPSNKLA---IVHILGLLSNLFTTLDIHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTL-LDDFAPMVPQLCEMLGTIPQTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFM
3	PROSPECT2	1jdha	0.097	0.990	1.774	threading_3	AVVNLIRPELTKLLNDEDQSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHGLQKMVALLTTDCLQILAYGSGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVQRLVQNCLWTLRNLSDAATKQETLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNA----VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGELLHSRN
4	PPA-I	3zuxA	0.143	0.725	1.092	threading_4	---------------------------------NILSKISSFIGKTFSLWAALFAAAAFFATFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTA-----SNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVA---AIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIG---YLLGFFAAKWTGLPYDAQKALTIEVGMQ----------NSGLAAALAAAHFAAVVAVPGALFSVWHNISGSLLATYWAAKA------------------------------------------------------------
5	HHPRED-l	3qnq_A	0.157	0.877	2.440	threading_5	---------------RFLEKYVMPVAGKVA-EQRHLLAIRDGLVLTMPFLIIGSIFLIISTLIPGY-------SEFMA--------SL--FGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKLASGALSLFLLATPFQVAYMPGTKGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKIKMPETFAALIP-----GFIVVTVVWIIRLIFESIHNVVGKLLQEPLSILGASGAVIAVILVHVLWACGIHGATIVGGVMSNRIAFQAGQITFLWIYMGGSGATLALVVGMLL-----FAR--SQQLKSLGRLSIAPGIFNINEMVMPIV-MNPLLLIP-FIVVPVVLTIVSYFWGLVARPSAAVTWTTPIGSKVILQLVNFALA---FVIYLPFLKIWDKQKIAEEKGE-
6	HHPRED-g	3qnq_A	0.165	0.848	1.617	threading_6	----------------------RFLEKAGKVEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLIPGYS-------EFMAS---------L-FGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKV-DALASGALSLVPFQVAPGKESIGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKIKMPETFAALIPGFIVVTVVW-IIRLIFEHTTGSIHNVVGKLLQEPLSILGASLAVIAVILVHVLWACGIHGDQNRIAFQAGQ----DVPNTDLWIYMGGSGATLALVVGMLL-----FA-R-SQQLKSLGRLSIAPGIFNINEMVT-FGMMNPLLLIP-FIVVPVVLTIVSYFWGLVARPSAAVTWTTPIGSGVILQLVNFA----LAFVIYLFLKIWDKQKGEA-----
7	SP3	2xwub	0.087	0.995	0.483	threading_7	ALLDQVEHMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAQQVYRPVYFQLVDVLLHKAQFPSDEEYGF--WSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAPSNKLAIVHILGLLSNLFTTLDIHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRTIPQTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFM
8	SAM-T99	2r4qA	0.147	0.082	1.093	threading_8	ERFKGKRVLQVPVTAGIRRPQELIEKANQDAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IY---------------------------------------------------------------------------------------------------------------------
9	MUSTER	3qnqA	0.171	0.860	0.733	threading_9	LE-KYVMPVAGKV--AEQ------------------RHLLAGLVLTMPFLIIGSIFLIIS-------LPIPGYSEFMASLFGKNWNVA----------LGYPVSATFNIMALIAVFGIAYRLGKVDALASGALSLVTF-TPFQVAYIMPGTKGVIPAALMGSGLFVAMIIAIISTEIYRFLVQKIKMPRSFAALIPGFI--VTVVWIIRLIFEHTTFGIHNVVGKLLQEPLSILGASWGAVIAVILVHVLWA-CGGPIWLSLMDQNRIAFQAGTITAQFFDLWIYM--LALVVGMLLFAR-------SQQLKSLGRLSIAPGIFNINE--VTFGM-NPLLLIPFIVVPVVLTIVSYFAMESGAAVT-SGYLGSGGISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA---
10	SPARKS	3m1ic	0.096	0.949	0.785	threading_10	ALLESDESLLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSE-WSWHNINTLSWAIGSISGTMSEDTEKRFV-----VTVIKDLLDGKDNKAVVASDIMYVQYPRFLKA-HWNFLRTVILKLFEF--MHETHEGVQDMACDTFIKIVQKCPRESEPFIQTIIRDIQKTDLQ-PQQVHTFYKACGIIISEERSERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCT-SMGADFYPQLGHI-YYNMLQLYRAVSSMIS--AQVAAEG----LIATKTPKVRGLRTIKKEILKLVETYISK---ARNLDDVVKVL

Predicted Tertiary Structure


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TM-score=0.764 to 1pw4A SCOP code=f.38.1.1	TM-score=0.762 to 1t5jA SCOP code=a.209.1.1	TM-score=0.599 to 1qbkB SCOP code=a.118.1.1	TM-score=0.615 to 1wa5B SCOP code=a.118.1.1	TM-score=0.406 to 2q7nB SCOP code=a.26.1.1