Template-based Modeling Results for PTFLB_ECOLI

Submitted Primary Sequence

>Length 483
MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH
554211000000010000000000210121034131202010221221314012310230100000003202233322222220010102200320220012012213212232223223332322211111111001100000000000000200121122223123111000100210010001000000000000100222000000000000101011012100000000000100000010133131131034021100010011100001012111210010010012002302210100000000000001110100100100000002321111000000000102000000010023112331230000000000000021001101201110000000000000000000103120101000000001112000000000000000000010021222223232223322444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH
1	PROSPECT2	1b3ua	0.087	0.950	1.714	threading_1	AAADGVLIDELRNED-VQLRLNSIKKLSTIALALG------------------VERTRSE--LLPFLTDTIYDEDEVLLAGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVEHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKASDDTPMVRRAAASKLGEFALDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLFFDEKLNSLWLVDHVYAIREAATSKKLVEKFGKEWAHATIIPK---VLAMSGDPNYLHRMTTLFCINVLSEVCVAKSLQKIGPILDNSTLQSEVKPLA
2	PROSPECT2	1jdha	0.097	0.919	1.712	threading_2	AVVNL---------IRAIPELTKQVVVNKAAVMVHQLSKKEASRHAIMRSTNDVETARCTAGTLHNLSHHREGLLAIFKSGVKMLGSPVDSVLFYAITTLHNLLLHQE----------GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA-----------YGNQESKLIILASG--GPQALVNIMTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLV--QNCLWTLRNLSDAATKQEGMEGVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNA----VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPR-LVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR
3	SPARKS	2kyra	0.370	0.224	2.880	threading_3	--MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPE--DNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PPA-I	2kyrA	0.370	0.224	2.477	threading_4	--MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPE--DNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1w63A	0.100	0.952	1.697	threading_5	MPAPIRIRTIRTARTQAEEREMIQKECAAIRSSFR------------EEDNTYRCRNVAKLLYMHMLGYPAHFGQLE-----------CLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNTKNLLNEKNHGVLHTSVVLLTEMCVPQLVRILKNLIMSGYSPSGISDPFLQVRILRLLRILGRNDDDSSILAQVAGNAILYETVLTIMDIKSESGLRVLAINILGRFLLRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAIPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSEK
6	HHPRED-l	2kyr_A	0.370	0.224	5.491	threading_6	--MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPE--DNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	2kyr_A	0.370	0.224	4.815	threading_7	MS--KKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPE--DNERFESRDVYEITLQDAIKNAAGIIKEIEEMIAS----EQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	1ejlI	0.104	0.839	1.643	threading_8	VNWSVEDIVKGINSNNLESQLQATQAARKLLS---------------REKQPPIDNIIRAGLI----------PKFVSFLGKT----DCSPIQFESAWALTNI---------ASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQ-------IQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNSGGTVEQIVYLVH----------CGIIEPLLSAKDTKIIQVIL-DAISNIFQAAEKLGE----------------------TEKLSIMIEECGGLDKIEALQRHENESVYKASLNYFS
9	SP3	2kyra	0.370	0.224	2.821	threading_9	--MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPE--DNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-l	3qnq_A	0.144	0.749	1.670	threading_10	----------------------------------------------------------------------------------------------------R---------FLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIP-G--YSEFMASLFNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKLASGALSLFLLATPFQIALMGSQGLFVAMIIAIISTEIYRFLVQIKMPETVPPAVTAALIPGFIVVTVVWIIRLIFESIHNVVGKLLQEPLSILGASGAVIAVILVHVLWACGIHGATIVGGVMSNRIAFQAGQITFDLWIYMGGSGATLALVVGMLLFAR--SQQLKSLGRLSIAPGIFNINEMVMPIVM-NPLLLIP-FIVVPVVLTIVSYFWGLVAAVTWTTPIL-FSGLGSGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----

Predicted Tertiary Structure


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TM-score=0.521 to 2r48A SCOP code=c.44.2.2	TM-score=0.710 to 1b3uA SCOP code=a.118.1.2	TM-score=0.656 to 1xm9A SCOP code=a.118.1.24	TM-score=0.522 to 2r48A SCOP code=c.44.2.2	TM-score=0.486 to 1ouvA SCOP code=a.118.18.1