Template-based Modeling Results for K1PF_ECOLI

Submitted Primary Sequence

>Length 312
MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN
CCCCEEEEECCCEEEEEEEECCCCCCCEEECCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN
352200000000000000102203322101031000114020000020042031200000000321120002002422020200203340200010025322101001100301221022002101210241100000020132012300120021033211100010133101100310010020123101210323133231012003103432010000000330000012201000211303120100000000000000012432032002000000000012232210233101201331212226
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN
1	MUSTER	2jg5A	0.289	0.974	3.054	threading_1	---MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKT--GQETEINAPGPHITSTQFEQLLQQIKN-TTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDL--ATRDAIEKIKSQVTISVLD
2	SPARKS	3n1ca	0.294	0.981	4.614	threading_2	-MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVASGEQYRFVMPGAALNEDEFRQLEEQVLE-IESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAINIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR----
3	PROSPECT2	2jg5A	0.293	0.974	4.363	threading_3	M---IYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLK--TGQETEINAPGPHITSTQFEQLLQQI-KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDE--DLATRDAIEKIKSQVTISVLE
4	PPA-I	2jg5A	0.289	0.974	3.692	threading_4	---MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLK--TGQETEINAPGPHITSTQFEQLLQQIKN-TTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED--LATRDAIEKIKSQVTISVLD
5	HHPRED-l	2f02_A	0.258	0.968	2.655	threading_5	-SL-IVTVT-NPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGFHGAFIANELKKANIPQAFTSIKEETRDSIAILHEG-NQTEILEAGPTVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLPWKPYLIKPNLEELEGLLGQDFSPLAAVQTALTKP-FAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWG-AAG-ANAQER-TGHVDVENVKKHL-NIQVVEI-
6	HHPRED-g	2ajr_A	0.247	0.962	3.029	threading_6	----VLTVTLNPALDREIFIEDFQVNRLYRISKTQ-SPGGKGINVSIALSKLGVPSVATGFVGGY-GKILVEELRKILITTNFVYVEGETRENIEIIDENKTITAINFPGPDVTD-DVNHFLRRYK-TLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLERIYEGFPNVVKPDLGNHASFLGVDLKTFDDYVKLAEKLAEKS-QVSVVSYEVKNDIVATREGVLIRSKEEIDTSHLLGAGDAYVAG-VYYFIKGANFLE-AKFGFASALAATRRKEKY-PDLEAIKKEYDHFTVERVK
7	SP3	3n1ca	0.297	0.981	4.856	threading_7	MV-RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVASGEQYRFVMPGAALNEDEFRQLEEQVLE-IESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAINIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR----
8	SAM-T99	2jg5A	0.293	0.974	4.537	threading_8	---MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKL--KTGQETEINAPGPHITSTQFEQLLQQI-KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDE--DLATRDAIEKIKSQVTISVLD
9	MUSTER	3cqdB	0.298	0.978	3.029	threading_9	MV-RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVASGEQYRFVMPGAALNEDEFRQLEEQVLEI-ESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAINIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLS-----
10	SPARKS	3q1ya	0.271	0.981	4.527	threading_10	--SLIYTITLNPAIDRLLFIRELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVDDTNGSTMIPEAGFTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTL----AEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASAVMQQDSSSFDLEAAGKLKNQVSIIQLE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.911 to 2abqA SCOP code=c.72.1.1	TM-score=0.911 to 2abqA SCOP code=c.72.1.1	TM-score=0.906 to 2abqA SCOP code=c.72.1.1	TM-score=0.903 to 2abqA SCOP code=c.72.1.1	TM-score=0.913 to 2abqA SCOP code=c.72.1.1