Template-based Modeling Results for HPPK_ECOLI

Submitted Primary Sequence

>Length 159
MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCEEEECHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
331000000010210120012003001412313211002002021122432222100000010211231012102201222132232342022000000010121002232010002202120000100020023120131110220032222332443
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
1	MUSTER	1im6A	0.994	0.994	4.194	threading_1	-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGAVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
2	SPARKS	1eqoa	1.000	0.994	6.108	threading_2	-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
3	PROSPECT2	2qx0A	0.633	0.994	3.760	threading_3	MIRVYIALGSNLAMPLQQVSAAREALAHLPRSR-LVASPLYRTKPLGPQDQPDFLNAVVALDTSLPPEQLLDHTQAIERNQGRVRKEQRWGPRTLDLDIMLYGDQVIKTDRLTIPHYGLKAREFMLYPLADIAPDLIFPDGESLSECLKRVDKNGLVLW
4	PPA-I	1im6A	0.994	0.994	5.342	threading_4	-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGAVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
5	HHPRED-l	1cbk_A	0.567	0.987	5.845	threading_5	MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRL-RRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFADHKMIK-
6	HHPRED-g	1cbk_A	0.551	0.994	4.834	threading_6	MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRL-RRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFADKMIKLN
7	SP3	1eqoa	1.000	0.994	5.791	threading_7	-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
8	SAM-T99	1cbkA	0.571	0.969	5.260	threading_8	MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRL-RRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFADHK----
9	MUSTER	1cbkA	0.563	0.994	4.047	threading_9	MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRLR-RWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFADHKMIKN
10	SPARKS	2bmba	0.271	0.975	4.261	threading_10	WKRAFLAFGSNIGDRFKHIQMALQLLSREKTVKLRNISSIFESEPMYFKDQTPFMNGCVEVETLLTPSELLKLCKKIEYEELQ----RTIDLDIVMFLNSAGEDIIVNEPDLNIPHPRMLERTFVLEPLCEISPVHLHPTAEPIVDHLKQLQHDEDTLW

Predicted Tertiary Structure


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TM-score=0.995 to 1im6A TM-score=0.905 to native SCOP code=d.58.30.1	TM-score=0.995 to 1im6A TM-score=0.905 to native SCOP code=d.58.30.1	TM-score=0.933 to 1cbkA TM-score=0.979 to native SCOP code=d.58.30.1	TM-score=0.912 to 1cbkA TM-score=0.910 to native SCOP code=d.58.30.1	TM-score=0.995 to 1im6A TM-score=0.905 to native SCOP code=d.58.30.1

Experimental Structure

Download 1dy3A

SCOP code=d.58.30.1