Template-based Modeling Results for DYR_ECOLI


  Submitted Primary Sequence

>Length 159
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
CEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
200000001122000132200020221011013101210000012003101320222200000122223330110210210021024221000000030022002302100001010212010201302332011011221333333212000110234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1MUSTER2d0kA0.9561.0004.482threading_1AISLIAALAVDRVIGNENALPWNLPADLAWFKRNTLNKPVIYGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAAAGDVPEIFVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYSFEILERR
2SPARKS3ix9a0.3461.0004.594threading_2KIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRLLPKRETLILTRNPEEKDGVATFHDVQSVLDWYSAEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRK
3PROSPECT23tq8A0.4270.9874.023threading_3MITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKH--ERDNPYPFQFLELRRL
4PPA-I2d0kA0.9561.0004.730threading_4AISLIAALAVDRVIGNENALPWNLPADLAWFKRNTLNKPVIYGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAAAGDVPEIFVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYSFEILERR
5HHPRED-l1zdr_A0.3920.9943.441threading_5MISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMGHAIVMGRKTFEAIGRPLPGRDNVVVTGNRSFREGCLVLHSLEEVKQWISRADEVFIIGGAELFRATMPIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGKDEKNPYEHAFIIYER-
6HHPRED-g1zdr_A0.3901.0002.944threading_6MISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMGHAIVMGRKTFEAIGRPLPGRDNVVVTGNRSFPEGCLVLHSLEEVKQWISRADEVFIIGGAELFRATMPIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGKDEKNPYEHAFIIYERK
7SP33ix9a0.3461.0004.531threading_7KIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRLLPKRETLILTRNPEEKDGVATFHDVQSVLDWYSAEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRK
8SAM-T993fl8A0.3961.0003.896threading_8IVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKNPYTYYYHVYEKQ
9MUSTER3ia4A0.5471.0004.316threading_9IVSMIAALANNRVIGLDNKMPWHLPAELQLFKRATLGKPIVMGRNTFESIGRPLPGRLNIVLSRQTDYPEGVTVVATLEDAVVAAGDVEELMIIGGATIYNQCLAAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEHESYAADDKNPHNYRFSLLERV
10SPARKS1ra9_0.9941.0004.511threading_10MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR

  Predicted Tertiary Structure

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TM-score=0.828 to 1cz3B
TM-score=0.964 to native
SCOP code=c.71.1.1
TM-score=0.825 to 1cz3B
TM-score=0.962 to native
SCOP code=c.71.1.1
TM-score=0.867 to 2hqpA
TM-score=0.903 to native
SCOP code=c.71.1.1
TM-score=0.863 to 2hqpA
TM-score=0.912 to native
SCOP code=c.71.1.1
TM-score=0.828 to 1cz3B
TM-score=0.964 to native
SCOP code=c.71.1.1

  Experimental Structure

Download 1ddrA
SCOP code=c.71.1.1