Template-based Modeling Results for FIMB_ECOLI

Submitted Primary Sequence

>Length 200
MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL
54242333233102221022004113211220000000000000101001004021310213220000211442111000003300200320022023123232200001331330122101200110024021223100010000000000311000200020011210200100100111201100231113335434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL
1	MUSTER	1a0pA2	0.267	0.880	3.682	threading_1	----------KDLSEAQVERLLQAPLDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIG-KGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSKLSPHVLRHAFATHLLNHGADLRVVQMLL--SDLSTTQIYTHVATERLRQLHQ-----------
2	SPARKS	1a0p_2	0.267	0.880	4.420	threading_2	----------KDLSEAQVERLLQAPLDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI-GKGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSKLSPHVLRHAFATHLLNHGADLRVVQMLLSD--LSTTQIYTHVATERLRQLHQ-----------
3	PROSPECT2	2a3vA2	0.278	0.900	3.383	threading_3	---QLERKLPVVLTRDEIRRLLEIVD-----PKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYLHQKNHYLFPSFQRHHMNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHSGVLSPLSR------------L
4	PPA-I	1a0pA2	0.267	0.880	10.197	threading_4	----------KDLSEAQVERLLQAPLDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIG-KGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDEKLSPHVLRHAFATHLLNHGADLRVVQMLL--SDLSTTQIYTHVATERLRQLHQ-----------
5	HHPRED-l	1aih_A	0.182	0.850	4.726	threading_5	------ETELAFLYERDIYRLLAECDNSRN-PDLGLIVRICLATGARWSEAETLTQSQVMPYK--ITFTNTKSKKNRTVPISDELFDMLPKKR-----------GRLFNDA--------YESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAV-KFNPLSNPAQ-
6	HHPRED-g	2a3v_A	0.267	0.900	4.619	threading_6	QRSQLERKLPVVLTRDEIRRLLEIVD-----PKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYHQKRWHYLFPVMRRHHMNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTH------SGVLSRL---------
7	SP3	1a0p_2	0.267	0.880	4.034	threading_7	----------KDLSEAQVERLLQAPLDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI-GKGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSKLSPHVLRHAFATHLLNHGADLRVVQMLLSD--LSTTQIYTHVATERLRQLHQ-----------
8	SAM-T99	1a0pA	0.258	0.930	6.218	threading_8	FREDDPSAHLKDLSEAQVERLLQAPLIDPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI-GKGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGISEKLSPHVLRHAFATHLLNHGADLRVVQMLL--SDLSTTQIYTHVATERLRQLHQ-----------
9	MUSTER	2a3vB2	0.271	0.885	2.714	threading_9	-----------VLTRDEIRRLLEIVDP-----KHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRRWHYLFPSMRRHHMNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHVLDRGASGVL---SP----SRL
10	SPARKS	1a0p_	0.253	0.930	4.282	threading_10	FREDDPSAHLKDLSEAQVERLLQAPLDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI-GKGNKERLVPLGEEAVYWLETYLEHGRPWLGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSKLSPHVLRHAFATHLLNHGADLRVVQMLLSD--LSTTQIYTHVATERLRQLHQ-----------

Predicted Tertiary Structure


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TM-score=0.919 to 1a0pA SCOP code=a.60.9.1	TM-score=0.918 to 1a0pA SCOP code=a.60.9.1	TM-score=0.914 to 1a0pA SCOP code=a.60.9.1	TM-score=0.675 to 1ouqA SCOP code=a.60.9.1	TM-score=0.920 to 1a0pA SCOP code=a.60.9.1