Template-based Modeling Results for FDRA_ECOLI

Submitted Primary Sequence

>Length 555
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
301120222212100000000320241330210001100210120022010113202302220000002032222100200121022013322323222321230420220033133010000000031002002201424010000033021210110222133311000012011010011100102003402000001012001200100131220000000001321133110010110021023134010000002112311211012023223200000000111221333200000001100211011110101232303112100100111010010000000220213133233201112122120010022111112112200121002001210243312000000000100121102000200220011343533000000001145123222200200241200002012100200120123123123332221232110000002200210331222001121011121223013103324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
1	MUSTER	3dmyA	0.973	0.787	2.568	threading_1	----------------------------------------------------------------------------------------------------ALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNV--FSDNVTLEDEIQLKTRAREKGL-LVGPDCGTSIAGT-PLAFAN-VPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALE-LSADEKSEVLAFVSKPPAEAVRLKIVNA-KATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVETHQH-----GLDADSHQIIDLGDDFYTVGRPHP-IDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLS-----HTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
2	MUSTER	1eucA	0.190	0.532	1.030	threading_2	--------CSYTAS--RKHL------------------------------YVD---KNTK---VICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLPVFNTVKEAKEQ-TGATASVIYVPPPFAAAAINEAIDAEVPVVCITEGIPQQDMVRVKHRLLRQKTRLIGPNCPGVINPGIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGG----DPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSKPVVSFIAGLTAPPGRR--MGHAGAIIA-GGKGGAKEKITALQSAGVVVSMSP-----------AQLGTTIYKEFE-------KRKML--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	1euca	0.192	0.526	4.437	threading_3	-------------------------------------------------CSYTASRKHLYVDKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTGLPVFNTVKEAKEQ-TGATASVIYVPPPFAAAAINEAIDAEVLVVCITEGIPQQDMVRVKHRLRQGKTRLIGPNCPGVINPGIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGG----DPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHKSKPVVSFIAGLTAPPGRR--MGHAGAII-AGGKGGAKEKITALQSAGVVVSMS-----------PAQLGTTIYKEFE-------KRKML--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SPARKS	3dmya	0.933	0.780	8.166	threading_4	----------------------------------------------------------------------------------------------------ALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNV--FSDNVTLEDEIQLKTRAREKG-LLVGPDCGTSIAGAFANVP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALELSA-DEKSEVLAFVSKPPA--EAVRLKIVNAKTGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVET-----HQHGLDADSHQIIDLGDDFYTVGRPHP-IDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLS-----HTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
5	HHPRED-g	2fp4_A	0.184	0.528	1.650	threading_5	-------------------------------------SYTA----------SRKHLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH-LGLPVFNTVKEAQTGATASVIYVPPPFAAAAINEAIDAEVPVVCITEGIPQQDMVRVKHLLRQGKTRLIGPNCPGVINPGIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGG----DPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHKSKPVVSFIAGLTAPPGRR--MG-AGAII-AGGKGGAKEKITALQSAGVVVSMSP-----------AQLGTTIYKEFEK-------RKML--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	3dmyA	0.851	0.786	4.166	threading_6	ALTQV----------------------------------------------------------------------------------------------------RRWDSACQKLPDANLALISVAGEYAAELANQALDRNL--NVFSDNVTLEDEIQLKTRAREKGL-LVGPDCGTSIAGTPLAF--ANVPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDL---SREVGGISALTALELSADEKSEVLAFVSKPPAEAVRLKIVNAKTGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVETHQHG-----LDADSHQIIDLGDDFYTVGRPHP-IDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPL-----SHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
7	SP3	1euca	0.186	0.532	4.572	threading_7	---------------------------------------CSYTASRKHL-YVDKNTK------VICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLPVFNTVKEAKEQ-TGATASVIYVPPPFAAAAINEAIDAEVLVVCITEGIPQQDMVRVKHRLRQGKTRLIGPNCPGVINPGIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGG----DPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHKSKPVVSFIAGLTAPPGRR--MGHAGAII-AGGKGGAKEKITALQSAGVVVSMSP--------AQLGTTIYKEFEKRKML------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PPA-I	3dmyA	0.959	0.787	4.284	threading_8	----------------------------------------------------------------------------------------------------ALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNV--FSDNVTLEDEIQLKTRAREKGL-LVGPDCGTSIAGTP--LAFANVPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALE-LSADEKSEVLAFVSKPPAEAVRLKIVNA-KATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVETHQHG-----LDADSHQIIDLGDDFYTVGRPHP-IDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLS-----HTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
9	SPARKS	3pffa	0.118	0.596	4.323	threading_9	EVTIFVRRPNYQEGLRVMGEVGKTTGIPGTETH---M-TAIVGMALGHRPIPGKSTTLFSRHTAIVWGMQTRQGMLDFDYVCSRDESVAAMVYPFTGGHKEIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNAQITIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGIGILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGG----DRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGIKEGLTKPIVCWCIGTCATMQ---------------ASETAVAKNQALKEAGVFVPRS-----------FDELGEIIQSVYEDLVANGVIVP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-l	3dmy_A	1.000	0.786	8.784	threading_10	----------------------------------------------------------------------------------------------------ALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNV--FSDNVTLEDEIQLKTRAREKGLLV-GPDCGTS-IAGTPLAFANV-PEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALE-LSADEKSEVLAFVSKPPAEAVRLKIVNA-KATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVE---THQHG--LDADSHQIIDLGDDFYTVGRPHP-IDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLS-----HTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERL-

Predicted Tertiary Structure


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TM-score=0.519 to 1oi7A TM-score=0.993 to native SCOP code=c.2.1.8	TM-score=0.520 to 1oi7A TM-score=0.993 to native SCOP code=c.2.1.8	TM-score=0.734 to 1eucA TM-score=0.266 to native SCOP code=c.2.1.8	TM-score=0.730 to 1eucA TM-score=0.270 to native SCOP code=c.2.1.8	TM-score=0.511 to 2csuA TM-score=0.985 to native SCOP code=c.2.1.8

Experimental Structure

Download 3dmyA

SCOP code=c.2.1.8