Template-based Modeling Results for F16PA_ECOLI

Submitted Primary Sequence

>Length 332
MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA
CEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCEEEEECCCCEECCCCCEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA
32100211122134123122200100100220021012102301023111121132232200210110012001100332320000012333311113213312000000102002101010000000000212231222121310023122100000000000000000011212000011320100002331201331210012200122123003200310243332233212010000001100100131100001112323302010001000000002201020021332003120320222100000133102102310431344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA
1	MUSTER	2qvrA	0.979	0.982	3.509	threading_1	-KTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHA-KYVVLDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSST-LVYTTGCGVHAFTYDPSLGVFCLCQE-RRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECN-PAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGND-HVEDVERFIREFPDA
2	SPARKS	1frpa	0.423	0.961	8.523	threading_2	IVTLTRFVMEQGRKA-RGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGA-------VKKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNST--DEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFP-PDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA--
3	PROSPECT2	1d9qA	0.453	0.952	5.811	threading_3	IITLTSWLLQQEQK-GIIDAELTIVLSSISMACKQIASLVQRANI---------SNLTGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPNDECLPNTLIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDL-KEPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVEKVEKYL-----A
4	PPA-I	1fsaA	0.415	0.988	5.875	threading_4	IVTLTRFVMEQGRK-ARGTGEMTQLLNSLCTAVAAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNST--DEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFP-PDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHAAK
5	HHPRED-l	2gq1_A	1.000	0.913	6.945	threading_5	-KTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINK----------------------LDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVL-DPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSST-LVYTTGCGVHAFTYDPSLGVFCLCQER-RFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNP-AFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDH-VEDVERFIREFPD-
6	HHPRED-g	2gq1_A	1.000	0.916	5.769	threading_6	-KTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINK----------------------LDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVL-DPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSST-LVYTTGCGVHAFTYDPSLGVFCLCQER-RFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNP-AFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDH-VEDVERFIREFPDA
7	SP3	1frpa	0.423	0.961	8.098	threading_7	IVTLTRFVMEQGRK-ARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGA-------VKKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNST--DEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPP-DNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA--
8	SAM-T99	1fsaA	0.417	0.982	6.214	threading_8	IVTLTRFVMEQGRKARG-TGEMTQLLNSLCTAVAAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNS--TDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPP---SAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHAAK
9	MUSTER	1fsaA	0.415	0.988	3.412	threading_9	IVTLTRFVMEQGRK-ARGTGEMTQLLNSLCTAVAAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNST--DEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFP-PDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHAAK
10	SPARKS	3uksa	0.268	0.898	7.777	threading_10	LPSLDQLLKEQ-----GADQTLTDLILAILDRCGKIASALQGT------------------SLTVDVIAENLLRSWAQSGSAVRAVCSEEDIHL--QECHKNGEFILCWDPLDGSSIIDCNWAVGSIVSIWRIGHHGVQWQGADLIQKTGRQQVASLIVVYGPRTTGVVAVNVDAGGIVKEGTAGKFICRGKPIIKPQ-AKIFSPANLRAAQDLPAYKQLIEFWM------EKRYTLRYTGGLVPDVYQIFVKQGVFCNPASKAAP-AKLRMCFEVLAIALVVEAAGGRTSNGQKSLLDVAIEHMDHRSALCCGSADEIKRMEETFAALSG-

Predicted Tertiary Structure


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TM-score=0.877 to 1fsaA TM-score=0.998 to native SCOP code=e.7.1.1	TM-score=0.979 to 1fsaA TM-score=0.891 to native SCOP code=e.7.1.1	TM-score=0.958 to 1fsaA TM-score=0.891 to native SCOP code=e.7.1.1	TM-score=0.940 to 1d9qB TM-score=0.852 to native SCOP code=e.7.1.1	TM-score=0.974 to 1fsaA TM-score=0.893 to native SCOP code=e.7.1.1

Experimental Structure

Download 2qvrA

SCOP code=e.7.1.1