Template-based Modeling Results for EUTD_ECOLI

Submitted Primary Sequence

>Length 338
MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE
CCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE
42123023102513110000312233002002202422001000001121012003323010310200113112201210022012312332221012111101000000011130100000111102100200131022332121000000000322210000000000220102100200110020022012320100000102311162210110230021024201401010301000001230023202203131400000000020010001001200202000000200210000012101121001000000021223133321133225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE
1	MUSTER	1xcoD	0.417	0.950	3.411	threading_1	DLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG--EEQYVFADCAINIAPDSQDLAEIAIESANTAKMF-DIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--------------
2	SPARKS	1qzta	0.353	0.964	6.594	threading_2	TFLEKISERAKKLNKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAG--DLDLSKAKIVDPKTYEKKDEYINAFYELRKKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAAQDK----------
3	PROSPECT2	1td9A	0.421	0.950	4.481	threading_3	MLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMAR--GEEQYVFADCAINIAPDSQDLAEIAIESANTAKMF-DIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQA--------------L
4	PPA-I	1xcoD	0.417	0.950	5.754	threading_4	DLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG--EEQYVFADCAINIAPDSQDLAEIAIESANTAKMF-DIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--------------
5	HHPRED-l	1vmi_A	0.997	0.932	6.477	threading_5	AIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVA-DGLQVIDPHGNLA-REEFAHRWLARAGEKTPPDALEKLTDPL-FAAA-VSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFL-LPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVA-LSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANV-VFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAP-HDLSRGCSVQEIIELALVAAVPR---------------
6	HHPRED-g	1vmi_A	0.997	0.932	5.733	threading_6	AIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVA-DGLQVIDPHGNLA-REEFAHRWLARAGEKTPPDALEKLTDPL-FAAA-VSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFL-LPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVA-LSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANV-VFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAP-HDLSRGCSVQEIIELALVAAVPR---------------
7	SP3	1qzta	0.353	0.964	6.594	threading_7	TFLEKISERAKKLNKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLD--LSKAKIVDPKTYEKKDEYINAFYELRKKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAAQDK----------
8	SAM-T99	1xcoD	0.417	0.950	6.362	threading_8	DLFSTVQEKVAGKDVKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGMEDLVQAFVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARG--EEQYVFADCAINIAPDSQDLAEIAIESANTAKM-FDIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAAQAL--------------
9	MUSTER	1qztA	0.353	0.964	3.359	threading_9	TFLEKISERAKKLNKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLD--LSKAKIVDPKTYEKKDEYINAFYELRKKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAAQDK----------
10	SPARKS	1vmia	0.927	0.932	6.213	threading_10	AIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGV-ADGLQVIDPHGNLAREEFAHRWLARA-GEKTPPDALEKLTDP--LFAAAVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLLPQYS-GPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVA-LSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANV-VFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPHD-LSRGCSVQEIIELALVAAVPR---------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.967 to 1xcoD TM-score=0.929 to native SCOP code=c.77.1.5	TM-score=0.967 to 1xcoD TM-score=0.929 to native SCOP code=c.77.1.5	TM-score=0.970 to 1qztA TM-score=0.903 to native SCOP code=c.77.1.5	TM-score=0.964 to 1xcoD TM-score=0.936 to native SCOP code=c.77.1.5	TM-score=0.967 to 1xcoD TM-score=0.929 to native SCOP code=c.77.1.5

Experimental Structure

Download 1vmiA

SCOP code=c.77.1.5